Difference between revisions of "TSS:Mm 100196.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000147508.1:294 BC018473:294 AF118847:-301 ENSMUST00000145570.7:-302 AK156340:-320 AK158468:-332 AF118272:-409 ENSMUST00000132056.7:-482 AF118273:-482 ENSMUST00000156293.7:-484 NR_003364 | + | |all_trans=ENSMUST00000147508.1:294 BC018473:294 AF118847:-301 ENSMUST00000145570.7:-302 AK156340:-320 AK158468:-332 AF118272:-409 ENSMUST00000132056.7:-482 AF118273:-482 ENSMUST00000156293.7:-484 NR_003364:-484 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_003364 | |nearest_refseq=NR_003364 | ||
|nearest_unigene=Mm.100084 | |nearest_unigene=Mm.100084 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=116752650 | |start=116752650 | ||
Revision as of 16:11, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 116752659 |
|---|---|
| End of the center position in the TSS region: | 116752660 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000147508.1 BC018473 |
|---|---|
| Distance: | 294 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000147508.1:294 BC018473:294 AF118847:-301 ENSMUST00000145570.7:-302 AK156340:-320 AK158468:-332 AF118272:-409 ENSMUST00000132056.7:-482 AF118273:-482 ENSMUST00000156293.7:-484 NR_003364:-484 |
TATA-Box annotation
| Distance to TSS: | 493 |
|---|---|
| Nearest PromoterID: | NR_003364 |
| Entrez ID: | 193217 |
| Nearest Unigene: | Mm.100084 |
| Nearest Refseq: | NR_003364 |
| Nearest Ensembl: | |
| Gene Name: | cDNA sequence BC018473 |
| Gene Alias: | - |
| Gene Description: | cDNA sequence BC018473 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
