Difference between revisions of "TSS:Mm 100202.1"
From referenceTSS
| Line 2: | Line 2: | ||
|1500035B17Rik= | |1500035B17Rik= | ||
|4933424L15Rik= | |4933424L15Rik= | ||
| − | |all_trans=ENSMUST00000175930.7:0 ENSMUST00000128784.1:0 AK016897:0 AK135294:0 AK168267:0 NM_028865 | + | |all_trans=ENSMUST00000175930.7:0 ENSMUST00000128784.1:0 AK016897:0 AK135294:0 AK168267:0 NM_028865:-5 ENSMUST00000176765.1:16 BC026936:31 AK003450:101 ENSMUST00000176799.7:104 AK160133:104 ENSMUST00000132593.7:106 ENSMUST00000140869.1:106 ENSMUST00000106370.9:-242 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 11: | Line 11: | ||
|entrez_id=74319 | |entrez_id=74319 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=1110005A03Rik | + | |gene_alias=1110005A03Rik{{!}}1500035B17Rik{{!}}4933424L15Rik |
|gene_description=methyltransferase like 23 | |gene_description=methyltransferase like 23 | ||
|gene_id=74319 | |gene_id=74319 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_028865 | |nearest_refseq=NM_028865 | ||
|nearest_unigene=Mm.429312 | |nearest_unigene=Mm.429312 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=mouse | |species=mouse | ||
|start=116843519 | |start=116843519 | ||
Revision as of 16:11, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 116843544 |
|---|---|
| End of the center position in the TSS region: | 116843545 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000175930.7 ENSMUST00000128784.1 AK016897 AK135294 AK168267 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENSMUST00000175930.7:0 ENSMUST00000128784.1:0 AK016897:0 AK135294:0 AK168267:0 NM_028865:-5 ENSMUST00000176765.1:16 BC026936:31 AK003450:101 ENSMUST00000176799.7:104 AK160133:104 ENSMUST00000132593.7:106 ENSMUST00000140869.1:106 ENSMUST00000106370.9:-242 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_028865 |
| Entrez ID: | 74319 |
| Nearest Unigene: | Mm.429312 |
| Nearest Refseq: | NM_028865 |
| Nearest Ensembl: | ENSMUSG00000090266 |
| Gene Name: | methyltransferase like 23 |
| Gene Alias: | 1110005A03Rik|1500035B17Rik|4933424L15Rik |
| Gene Description: | methyltransferase like 23 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
