Difference between revisions of "TSS:Mm 100209.1"
From referenceTSS
| Line 5: | Line 5: | ||
|Sfrs10= | |Sfrs10= | ||
|Sfrs2= | |Sfrs2= | ||
| − | |all_trans=ENSMUST00000135135.1:0 ENSMUST00000125920 | + | |all_trans=ENSMUST00000135135.1:0 ENSMUST00000125920.1:-163 AK080006:-163 ENSMUST00000136012.7:281 NM_001361585:281 BC100547:281 ENSMUST00000126661.1:298 AK007898:298 ENSMUST00000021173.13:339 AK032043:339 AK031384:341 ENSMUST00000151944.2:348 ENSMUST00000106365.8:414 BC079583:414 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-293 |
|end=116853481 | |end=116853481 | ||
|end_of_center_position=116853470 | |end_of_center_position=116853470 | ||
| − | |entrez_id= | + | |entrez_id=69900 |
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias= | + | |gene_alias=2600014M03Rik |
| − | |gene_description= | + | |gene_description=major facilitator superfamily domain containing 11 |
|gene_id=69900 | |gene_id=69900 | ||
|gene_name=major facilitator superfamily domain containing 11 | |gene_name=major facilitator superfamily domain containing 11 | ||
| Line 23: | Line 23: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1917150 | |hgnc_mgi_id=MGI:1917150 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSMUSG00000020818 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361585 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_178620 |
| − | |nearest_unigene=Mm. | + | |nearest_unigene=Mm.348004 |
| − | |num_trans= | + | |num_trans=14 |
|species=mouse | |species=mouse | ||
|start=116853457 | |start=116853457 | ||
Revision as of 16:11, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116853469 |
|---|---|
| End of the center position in the TSS region: | 116853470 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000135135.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENSMUST00000135135.1:0 ENSMUST00000125920.1:-163 AK080006:-163 ENSMUST00000136012.7:281 NM_001361585:281 BC100547:281 ENSMUST00000126661.1:298 AK007898:298 ENSMUST00000021173.13:339 AK032043:339 AK031384:341 ENSMUST00000151944.2:348 ENSMUST00000106365.8:414 BC079583:414 |
TATA-Box annotation
| Distance to TSS: | -293 |
|---|---|
| Nearest PromoterID: | NM_001361585 |
| Entrez ID: | 69900 |
| Nearest Unigene: | Mm.348004 |
| Nearest Refseq: | NM_178620 |
| Nearest Ensembl: | ENSMUSG00000020818 |
| Gene Name: | major facilitator superfamily domain containing 11 |
| Gene Alias: | 2600014M03Rik |
| Gene Description: | major facilitator superfamily domain containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
