Difference between revisions of "TSS:Mm 100210.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000136012.7:0 ENSMUST00000126661.1:0 ENSMUST00000021173.13:0 ENSMUST00000151944.2:0 | + | |all_trans=ENSMUST00000136012.7:0 ENSMUST00000126661.1:0 ENSMUST00000021173.13:0 ENSMUST00000151944.2:0 NM_001361585:0 BC100547:0 AK007898:0 AK032043:0 AK031384:0 ENSMUST00000106365.8:59 BC079583:59 NM_178620:164 NM_001361587:164 NM_001361586:164 BC088988:179 ENSMUST00000106363.9:190 BC145068:190 BC137971:191 BC137970:192 BC016209:195 AF015191:213 ENSMUST00000153084.2:242 ENSMUST00000135135.1:-279 ENSMUST00000125920.1:-458 AK080006:-458 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=32 |
|end=116853836 | |end=116853836 | ||
|end_of_center_position=116853795 | |end_of_center_position=116853795 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1917150 | |hgnc_mgi_id=MGI:1917150 | ||
|nearest_ensembl=ENSMUSG00000020818 | |nearest_ensembl=ENSMUSG00000020818 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361585 |
|nearest_refseq=NM_178620 | |nearest_refseq=NM_178620 | ||
|nearest_unigene=Mm.348004 | |nearest_unigene=Mm.348004 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=mouse | |species=mouse | ||
|start=116853752 | |start=116853752 | ||
|start_of_center_position=116853794 | |start_of_center_position=116853794 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000136012.7 ENSMUST00000126661.1 ENSMUST00000021173.13 ENSMUST00000151944.2 | + | |transcript_name=ENSMUST00000136012.7 ENSMUST00000126661.1 ENSMUST00000021173.13 ENSMUST00000151944.2 NM_001361585 BC100547 AK007898 AK032043 AK031384 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100210.1 | |tss_id=mm_100210.1 | ||
Revision as of 16:11, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 116853794 |
|---|---|
| End of the center position in the TSS region: | 116853795 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000136012.7 ENSMUST00000126661.1 ENSMUST00000021173.13 ENSMUST00000151944.2 NM_001361585 BC100547 AK007898 AK032043 AK031384 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENSMUST00000136012.7:0 ENSMUST00000126661.1:0 ENSMUST00000021173.13:0 ENSMUST00000151944.2:0 NM_001361585:0 BC100547:0 AK007898:0 AK032043:0 AK031384:0 ENSMUST00000106365.8:59 BC079583:59 NM_178620:164 NM_001361587:164 NM_001361586:164 BC088988:179 ENSMUST00000106363.9:190 BC145068:190 BC137971:191 BC137970:192 BC016209:195 AF015191:213 ENSMUST00000153084.2:242 ENSMUST00000135135.1:-279 ENSMUST00000125920.1:-458 AK080006:-458 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_001361585 |
| Entrez ID: | 69900 |
| Nearest Unigene: | Mm.348004 |
| Nearest Refseq: | NM_178620 |
| Nearest Ensembl: | ENSMUSG00000020818 |
| Gene Name: | major facilitator superfamily domain containing 11 |
| Gene Alias: | 2600014M03Rik |
| Gene Description: | major facilitator superfamily domain containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
