Difference between revisions of "TSS:Mm 100212.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GnT-IX= | |GnT-IX= | ||
| − | |all_trans=ENSMUST00000103027.9:60 NM_172948 | + | |all_trans=ENSMUST00000103027.9:60 NM_172948:60 BC094604:60 BC063084:60 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 10: | Line 10: | ||
|entrez_id=268510 | |entrez_id=268510 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| − | |gene_alias=C330018B01 | + | |gene_alias=C330018B01{{!}}GnT-IX{{!}}mGnTVB |
| − | |gene_description= | + | |gene_description=mannoside acetylglucosaminyltransferase 5, isoenzyme B |
|gene_id=268510 | |gene_id=268510 | ||
| − | |gene_name= | + | |gene_name=mannoside acetylglucosaminyltransferase 5, isoenzyme B |
|gene_source=MGI:3606200 | |gene_source=MGI:3606200 | ||
|gene_symbol=Mgat5b | |gene_symbol=Mgat5b | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_172948 | |nearest_refseq=NM_172948 | ||
|nearest_unigene=Mm.35141 | |nearest_unigene=Mm.35141 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=116918794 | |start=116918794 | ||
|start_of_center_position=116918798 | |start_of_center_position=116918798 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000103027.9 NM_172948 | + | |transcript_name=ENSMUST00000103027.9 NM_172948 BC094604 BC063084 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100212.1 | |tss_id=mm_100212.1 | ||
Revision as of 16:11, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116918798 |
|---|---|
| End of the center position in the TSS region: | 116918799 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000103027.9 NM_172948 BC094604 BC063084 |
|---|---|
| Distance: | 60 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000103027.9:60 NM_172948:60 BC094604:60 BC063084:60 |
TATA-Box annotation
| Distance to TSS: | -64 |
|---|---|
| Nearest PromoterID: | NM_172948 |
| Entrez ID: | 268510 |
| Nearest Unigene: | Mm.35141 |
| Nearest Refseq: | NM_172948 |
| Nearest Ensembl: | ENSMUSG00000043857 |
| Gene Name: | mannoside acetylglucosaminyltransferase 5, isoenzyme B |
| Gene Alias: | C330018B01|GnT-IX|mGnTVB |
| Gene Description: | mannoside acetylglucosaminyltransferase 5, isoenzyme B |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
