Difference between revisions of "TSS:Mm 100220.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000157904.1:0 BC037520:-377 ENSMUST00000182811.1:-438 AK171830:-438 ENSMUST00000145438.1:-450 | + | |all_trans=ENSMUST00000157904.1:0 BC037520:-377 ENSMUST00000182811.1:-438 AK171830:-438 ENSMUST00000145438.1:-450 AK012687:-450 ENSMUST00000233355.1:-452 ENSMUST00000149822.2:-457 NR_027059:-457 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 12: | Line 12: | ||
|gene_description=microRNA 6516 | |gene_description=microRNA 6516 | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=predicted gene, 26083 |
|gene_source=MGI:5455860 | |gene_source=MGI:5455860 | ||
|gene_symbol=Gm26083 | |gene_symbol=Gm26083 | ||
Revision as of 16:11, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 117077242 |
|---|---|
| End of the center position in the TSS region: | 117077243 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000157904.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000157904.1:0 BC037520:-377 ENSMUST00000182811.1:-438 AK171830:-438 ENSMUST00000145438.1:-450 AK012687:-450 ENSMUST00000233355.1:-452 ENSMUST00000149822.2:-457 NR_027059:-457 |
TATA-Box annotation
| Distance to TSS: | -106 |
|---|---|
| Nearest PromoterID: | NR_105853 |
| Entrez ID: | 102465258 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_105853 |
| Nearest Ensembl: | ENSMUSG00000104740 |
| Gene Name: | predicted gene, 26083 |
| Gene Alias: | mmu-mir-6516 |
| Gene Description: | microRNA 6516 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
