Difference between revisions of "TSS:Mm 10023.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=D83528:-15 BC012702:-117 AK144694:-124 ENSMUST00000085573.11:-134 AK141097:-134 D78141:-139 NM_011633 | + | |all_trans=D83528:-15 BC012702:-117 AK144694:-124 ENSMUST00000085573.11:-134 AK141097:-134 D78141:-139 NM_011633:-174 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_011633 | |nearest_refseq=NM_011633 | ||
|nearest_unigene=Mm.380491 | |nearest_unigene=Mm.380491 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=mouse | |species=mouse | ||
|start=192092420 | |start=192092420 | ||
Revision as of 16:12, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 192092422 |
|---|---|
| End of the center position in the TSS region: | 192092423 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | D83528 |
|---|---|
| Distance: | -15 |
| Num_trans: | 7 |
| All_trans: | D83528:-15 BC012702:-117 AK144694:-124 ENSMUST00000085573.11:-134 AK141097:-134 D78141:-139 NM_011633:-174 |
TATA-Box annotation
| Distance to TSS: | 176 |
|---|---|
| Nearest PromoterID: | NM_011633 |
| Entrez ID: | 22033 |
| Nearest Unigene: | Mm.380491 |
| Nearest Refseq: | NM_011633 |
| Nearest Ensembl: | |
| Gene Name: | TNF receptor-associated factor 5 |
| Gene Alias: | - |
| Gene Description: | TNF receptor-associated factor 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
