Difference between revisions of "TSS:Mm 10026.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000085573.11:0 NM_011633 | + | |all_trans=ENSMUST00000085573.11:0 NM_011633:0 BC012702:0 AK144694:0 D78141:0 AK141097:0 D83528:101 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_011633 | |nearest_refseq=NM_011633 | ||
|nearest_unigene=Mm.380491 | |nearest_unigene=Mm.380491 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=mouse | |species=mouse | ||
|start=192092540 | |start=192092540 | ||
|start_of_center_position=192092579 | |start_of_center_position=192092579 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000085573.11 NM_011633 | + | |transcript_name=ENSMUST00000085573.11 NM_011633 BC012702 AK144694 D78141 AK141097 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_10026.1 | |tss_id=mm_10026.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=E9QMA6 | + | |uniprot_id=E9QMA6 Q3UMS9 |
}} | }} | ||
Revision as of 16:12, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 192092579 |
|---|---|
| End of the center position in the TSS region: | 192092580 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000085573.11 NM_011633 BC012702 AK144694 D78141 AK141097 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000085573.11:0 NM_011633:0 BC012702:0 AK144694:0 D78141:0 AK141097:0 D83528:101 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_011633 |
| Entrez ID: | 22033 |
| Nearest Unigene: | Mm.380491 |
| Nearest Refseq: | NM_011633 |
| Nearest Ensembl: | |
| Gene Name: | TNF receptor-associated factor 5 |
| Gene Alias: | - |
| Gene Description: | TNF receptor-associated factor 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
