Difference between revisions of "TSS:Mm 100270.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000106344.7:0 AK147471:-65 | + | |all_trans=ENSMUST00000106344.7:0 AK147471:-65 ENSMUST00000141115.7:-226 AK147551:-226 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 9: | Line 9: | ||
|entrez_id=217351 | |entrez_id=217351 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=9930033H14Rik | + | |gene_alias=9930033H14Rik{{!}}mKIAA1582 |
|gene_description=trinucleotide repeat containing 6C | |gene_description=trinucleotide repeat containing 6C | ||
|gene_id=217351 | |gene_id=217351 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_198022 | |nearest_refseq=NM_198022 | ||
|nearest_unigene=Mm.40272 | |nearest_unigene=Mm.40272 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=117654798 | |start=117654798 | ||
Revision as of 16:13, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 117654811 |
|---|---|
| End of the center position in the TSS region: | 117654812 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000106344.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000106344.7:0 AK147471:-65 ENSMUST00000141115.7:-226 AK147551:-226 |
TATA-Box annotation
| Distance to TSS: | 522 |
|---|---|
| Nearest PromoterID: | NM_198022 |
| Entrez ID: | 217351 |
| Nearest Unigene: | Mm.40272 |
| Nearest Refseq: | NM_198022 |
| Nearest Ensembl: | ENSMUSG00000025571 |
| Gene Name: | trinucleotide repeat containing 6C |
| Gene Alias: | 9930033H14Rik|mKIAA1582 |
| Gene Description: | trinucleotide repeat containing 6C |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
