Difference between revisions of "TSS:Mm 100271.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.01 |distance= |distance_to_tss=11220 |end=117665514 |entrez_id=217351 |gc_percent=0.383085 |gene_alias=9930033H14Rik|mKIAA1582 |gene_desc...") |
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|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=11220 | |distance_to_tss=11220 | ||
|end=117665514 | |end=117665514 | ||
| + | |end_of_center_position=117665509 | ||
|entrez_id=217351 | |entrez_id=217351 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
| − | |gene_alias=9930033H14Rik | + | |gene_alias=9930033H14Rik{{!}}mKIAA1582 |
|gene_description=trinucleotide repeat containing 6C | |gene_description=trinucleotide repeat containing 6C | ||
|gene_name=Tnrc6c | |gene_name=Tnrc6c | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mKIAA1582= | ||
|nearest_ensembl=ENSMUSG00000025571 | |nearest_ensembl=ENSMUSG00000025571 | ||
|nearest_promoter_id=NM_198022 | |nearest_promoter_id=NM_198022 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=117665503 | |start=117665503 | ||
| + | |start_of_center_position=117665508 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-1(TCTTTAATACAG,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:13, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 117665508 |
|---|---|
| End of the center position in the TSS region: | 117665509 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 11220 |
|---|---|
| Nearest PromoterID: | NM_198022 |
| Entrez ID: | 217351 |
| Nearest Unigene: | Mm.40272 |
| Nearest Refseq: | NM_198022 |
| Nearest Ensembl: | ENSMUSG00000025571 |
| Gene Name: | Tnrc6c |
| Gene Alias: | 9930033H14Rik|mKIAA1582 |
| Gene Description: | trinucleotide repeat containing 6C |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -1(TCTTTAATACAG,+,0.00) |
