Difference between revisions of "TSS:Mm 100285.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000177241.1:0 ENSMUST00000120928.1:0 AK157343:0 AJ002307:0 AF364049:-1 BC004829:-4 ENSMUST00000177131.7:-5 AF151985:-7 ENSMUST00000175737.1:9 AK089424:-18 AK170681:-19 ENSMUST00000026649.13:-20 ENSMUST00000132298.1:-20 AK150234:-20 AK004030:-20 NM_009304 | + | |all_trans=ENSMUST00000177241.1:0 ENSMUST00000120928.1:0 AK157343:0 AJ002307:0 AF364049:-1 BC004829:-4 ENSMUST00000177131.7:-5 AF151985:-7 ENSMUST00000175737.1:9 AK089424:-18 AK170681:-19 ENSMUST00000026649.13:-20 ENSMUST00000132298.1:-20 AK150234:-20 AK004030:-20 NM_009304:-21 AK185198:37 |
|cellugyrin= | |cellugyrin= | ||
|chr=chr11 | |chr=chr11 | ||
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|entrez_id=20973 | |entrez_id=20973 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=Clast2 | + | |gene_alias=Clast2{{!}}cellugyrin |
|gene_description=synaptogyrin 2 | |gene_description=synaptogyrin 2 | ||
|gene_id=20973 | |gene_id=20973 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_009304 | |nearest_refseq=NM_009304 | ||
|nearest_unigene=Mm.468228 | |nearest_unigene=Mm.468228 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=mouse | |species=mouse | ||
|start=117809687 | |start=117809687 | ||
Revision as of 16:13, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 117809695 |
|---|---|
| End of the center position in the TSS region: | 117809696 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000177241.1 ENSMUST00000120928.1 AK157343 AJ002307 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000177241.1:0 ENSMUST00000120928.1:0 AK157343:0 AJ002307:0 AF364049:-1 BC004829:-4 ENSMUST00000177131.7:-5 AF151985:-7 ENSMUST00000175737.1:9 AK089424:-18 AK170681:-19 ENSMUST00000026649.13:-20 ENSMUST00000132298.1:-20 AK150234:-20 AK004030:-20 NM_009304:-21 AK185198:37 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_009304 |
| Entrez ID: | 20973 |
| Nearest Unigene: | Mm.468228 |
| Nearest Refseq: | NM_009304 |
| Nearest Ensembl: | ENSMUSG00000048277 |
| Gene Name: | synaptogyrin 2 |
| Gene Alias: | Clast2|cellugyrin |
| Gene Description: | synaptogyrin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
