Difference between revisions of "TSS:Mm 100296.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Tk-1= | ||
| + | |Tk1a= | ||
| + | |Tk1b= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-2604 |
|end=117829510 | |end=117829510 | ||
| − | |entrez_id= | + | |end_of_center_position=117829501 |
| + | |entrez_id=71562 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias= | + | |gene_alias=9030621K19Rik{{!}}Ammd{{!}}FKF{{!}}KFA{{!}}Kf{{!}}formylase |
| − | |gene_description= | + | |gene_description=arylformamidase |
| − | |gene_name= | + | |gene_name=Afmid |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSMUSG00000017718 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363158 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_027827 |
| − | |nearest_unigene=Mm. | + | |nearest_unigene=Mm.273958 |
|num_trans=0 | |num_trans=0 | ||
|species=mouse | |species=mouse | ||
|start=117829490 | |start=117829490 | ||
| + | |start_of_center_position=117829500 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:13, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 117829500 |
|---|---|
| End of the center position in the TSS region: | 117829501 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -2604 |
|---|---|
| Nearest PromoterID: | NM_001363158 |
| Entrez ID: | 71562 |
| Nearest Unigene: | Mm.273958 |
| Nearest Refseq: | NM_027827 |
| Nearest Ensembl: | ENSMUSG00000017718 |
| Gene Name: | Afmid |
| Gene Alias: | 9030621K19Rik|Ammd|FKF|KFA|Kf|formylase |
| Gene Description: | arylformamidase |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
