Difference between revisions of "TSS:Mm 100298.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Tk1a= | |Tk1a= | ||
|Tk1b= | |Tk1b= | ||
| − | |all_trans=ENSMUST00000131268.1:6 ENSMUST00000148016.7 | + | |all_trans=ENSMUST00000131268.1:6 ENSMUST00000148016.7:-10 AK018563:-10 ENSMUST00000139945.7:-136 NM_001363158:-136 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=6 | |distance=6 | ||
| − | |distance_to_tss= | + | |distance_to_tss=149 |
|end=117832267 | |end=117832267 | ||
|end_of_center_position=117832254 | |end_of_center_position=117832254 | ||
| − | |entrez_id= | + | |entrez_id=71562 |
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias= | + | |gene_alias=9030621K19Rik{{!}}Ammd{{!}}FKF{{!}}KFA{{!}}Kf{{!}}formylase |
| − | |gene_description= | + | |gene_description=arylformamidase |
|gene_id=71562 | |gene_id=71562 | ||
|gene_name=arylformamidase | |gene_name=arylformamidase | ||
| Line 21: | Line 21: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2448704 | |hgnc_mgi_id=MGI:2448704 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSMUSG00000017718 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363158 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_027827 |
| − | |nearest_unigene=Mm. | + | |nearest_unigene=Mm.273958 |
|num_trans=5 | |num_trans=5 | ||
|species=mouse | |species=mouse | ||
Revision as of 16:13, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 117832253 |
|---|---|
| End of the center position in the TSS region: | 117832254 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000131268.1 |
|---|---|
| Distance: | 6 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000131268.1:6 ENSMUST00000148016.7:-10 AK018563:-10 ENSMUST00000139945.7:-136 NM_001363158:-136 |
TATA-Box annotation
| Distance to TSS: | 149 |
|---|---|
| Nearest PromoterID: | NM_001363158 |
| Entrez ID: | 71562 |
| Nearest Unigene: | Mm.273958 |
| Nearest Refseq: | NM_027827 |
| Nearest Ensembl: | ENSMUSG00000017718 |
| Gene Name: | arylformamidase |
| Gene Alias: | 9030621K19Rik|Ammd|FKF|KFA|Kf|formylase |
| Gene Description: | arylformamidase |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
