Difference between revisions of "TSS:Mm 10030.1"
From referenceTSS
| Line 2: | Line 2: | ||
|C730034D20Rik= | |C730034D20Rik= | ||
|E130101E15Rik= | |E130101E15Rik= | ||
| − | |all_trans=ENSMUST00000192128.5:0 BC020065:0 AK164939:-72 ENSMUST00000110849.9:-77 ENSMUST00000194395.5:-77 AK135612:-77 AK155440:-77 ENSMUST00000193322.1:-91 ENSMUST00000192491.5:-93 AK040839:-93 AK050287:-97 ENSMUST00000192158.5:-98 ENSMUST00000194493.1:-102 ENSMUST00000073279.12:-107 | + | |all_trans=ENSMUST00000192128.5:0 BC020065:0 AK164939:-72 ENSMUST00000110849.9:-77 ENSMUST00000194395.5:-77 AK135612:-77 AK155440:-77 ENSMUST00000193322.1:-91 ENSMUST00000192491.5:-93 AK040839:-93 AK050287:-97 ENSMUST00000192158.5:-98 ENSMUST00000194493.1:-102 ENSMUST00000073279.12:-107 NM_001290282:-107 NM_001346740:-107 NM_001290278:-107 NM_144814:-107 NM_001290280:-107 NM_001290279:-107 BC057141:108 AK203210:128 ENSMUST00000192866.5:-129 BC138938:135 BC138939:135 BC145469:135 ENSMUST00000193144.1:235 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 11: | Line 11: | ||
|entrez_id=214742 | |entrez_id=214742 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=4921514E24Rik | + | |gene_alias=4921514E24Rik{{!}}C730034D20Rik{{!}}E130101E15Rik |
|gene_description=REST corepressor 3 | |gene_description=REST corepressor 3 | ||
|gene_id=214742 | |gene_id=214742 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=MGI:2441920 | |hgnc_mgi_id=MGI:2441920 | ||
|nearest_ensembl=ENSMUSG00000037395 | |nearest_ensembl=ENSMUSG00000037395 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001290280 |
|nearest_refseq=NM_144814 | |nearest_refseq=NM_144814 | ||
|nearest_unigene=Mm.207457 | |nearest_unigene=Mm.207457 | ||
| − | |num_trans= | + | |num_trans=27 |
|species=mouse | |species=mouse | ||
|start=192137894 | |start=192137894 | ||
Revision as of 16:13, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 192137913 |
|---|---|
| End of the center position in the TSS region: | 192137914 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000192128.5 BC020065 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | ENSMUST00000192128.5:0 BC020065:0 AK164939:-72 ENSMUST00000110849.9:-77 ENSMUST00000194395.5:-77 AK135612:-77 AK155440:-77 ENSMUST00000193322.1:-91 ENSMUST00000192491.5:-93 AK040839:-93 AK050287:-97 ENSMUST00000192158.5:-98 ENSMUST00000194493.1:-102 ENSMUST00000073279.12:-107 NM_001290282:-107 NM_001346740:-107 NM_001290278:-107 NM_144814:-107 NM_001290280:-107 NM_001290279:-107 BC057141:108 AK203210:128 ENSMUST00000192866.5:-129 BC138938:135 BC138939:135 BC145469:135 ENSMUST00000193144.1:235 |
TATA-Box annotation
| Distance to TSS: | 126 |
|---|---|
| Nearest PromoterID: | NM_001290280 |
| Entrez ID: | 214742 |
| Nearest Unigene: | Mm.207457 |
| Nearest Refseq: | NM_144814 |
| Nearest Ensembl: | ENSMUSG00000037395 |
| Gene Name: | REST corepressor 3 |
| Gene Alias: | 4921514E24Rik|C730034D20Rik|E130101E15Rik |
| Gene Description: | REST corepressor 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
