Difference between revisions of "TSS:Mm 100301.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Api4= | |Api4= | ||
|TIAP= | |TIAP= | ||
| − | |all_trans=ENSMUST00000081387.10:-23 AB013819:-23 AK018022:25 ENSMUST00000093906.4:37 NM_009689:-37 NM_001012273 | + | |all_trans=ENSMUST00000081387.10:-23 AB013819:-23 AK018022:25 ENSMUST00000093906.4:37 NM_009689:-37 NM_001012273:-37 BC004702:37 AK142768:40 AF077349:54 EU366955:69 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 11: | Line 11: | ||
|entrez_id=11799 | |entrez_id=11799 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=AAC-11 | + | |gene_alias=AAC-11{{!}}Api4{{!}}TIAP{{!}}survivin40 |
|gene_description=baculoviral IAP repeat-containing 5 | |gene_description=baculoviral IAP repeat-containing 5 | ||
|gene_id=11799 | |gene_id=11799 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=MGI:1203517 | |hgnc_mgi_id=MGI:1203517 | ||
|nearest_ensembl=ENSMUSG00000017716 | |nearest_ensembl=ENSMUSG00000017716 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001012273 |
|nearest_refseq=NM_009689 | |nearest_refseq=NM_009689 | ||
|nearest_unigene=Mm.8552 | |nearest_unigene=Mm.8552 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=117849273 | |start=117849273 | ||
Revision as of 16:13, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 117849277 |
|---|---|
| End of the center position in the TSS region: | 117849278 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000081387.10 AB013819 |
|---|---|
| Distance: | -23 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000081387.10:-23 AB013819:-23 AK018022:25 ENSMUST00000093906.4:37 NM_009689:-37 NM_001012273:-37 BC004702:37 AK142768:40 AF077349:54 EU366955:69 |
TATA-Box annotation
| Distance to TSS: | 41 |
|---|---|
| Nearest PromoterID: | NM_001012273 |
| Entrez ID: | 11799 |
| Nearest Unigene: | Mm.8552 |
| Nearest Refseq: | NM_009689 |
| Nearest Ensembl: | ENSMUSG00000017716 |
| Gene Name: | baculoviral IAP repeat-containing 5 |
| Gene Alias: | AAC-11|Api4|TIAP|survivin40 |
| Gene Description: | baculoviral IAP repeat-containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
