Difference between revisions of "TSS:Mm 10031.1"
From referenceTSS
| Line 2: | Line 2: | ||
|C730034D20Rik= | |C730034D20Rik= | ||
|E130101E15Rik= | |E130101E15Rik= | ||
| − | |all_trans=ENSMUST00000192128.5:29 BC020065:29 AK164939:-38 ENSMUST00000110849.9:-43 ENSMUST00000194395.5:-43 AK135612:-43 AK155440:-43 ENSMUST00000193322.1:-57 ENSMUST00000192491.5:-59 AK040839:-59 AK050287:-63 ENSMUST00000192158.5:-64 ENSMUST00000194493.1:-68 ENSMUST00000073279.12:-73 | + | |all_trans=ENSMUST00000192128.5:29 BC020065:29 AK164939:-38 ENSMUST00000110849.9:-43 ENSMUST00000194395.5:-43 AK135612:-43 AK155440:-43 ENSMUST00000193322.1:-57 ENSMUST00000192491.5:-59 AK040839:-59 AK050287:-63 ENSMUST00000192158.5:-64 ENSMUST00000194493.1:-68 ENSMUST00000073279.12:-73 NM_001290282:-73 NM_001346740:-73 NM_001290278:-73 NM_144814:-73 NM_001290280:-73 NM_001290279:-73 ENSMUST00000192866.5:-95 BC057141:169 AK203210:189 BC138938:196 BC138939:196 BC145469:196 ENSMUST00000193144.1:296 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 11: | Line 11: | ||
|entrez_id=214742 | |entrez_id=214742 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=4921514E24Rik | + | |gene_alias=4921514E24Rik{{!}}C730034D20Rik{{!}}E130101E15Rik |
|gene_description=REST corepressor 3 | |gene_description=REST corepressor 3 | ||
|gene_id=214742 | |gene_id=214742 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=MGI:2441920 | |hgnc_mgi_id=MGI:2441920 | ||
|nearest_ensembl=ENSMUSG00000037395 | |nearest_ensembl=ENSMUSG00000037395 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001290280 |
|nearest_refseq=NM_144814 | |nearest_refseq=NM_144814 | ||
|nearest_unigene=Mm.207457 | |nearest_unigene=Mm.207457 | ||
| − | |num_trans= | + | |num_trans=27 |
|species=mouse | |species=mouse | ||
|start=192137955 | |start=192137955 | ||
Revision as of 16:14, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 192137961 |
|---|---|
| End of the center position in the TSS region: | 192137962 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000192128.5 BC020065 |
|---|---|
| Distance: | 29 |
| Num_trans: | 27 |
| All_trans: | ENSMUST00000192128.5:29 BC020065:29 AK164939:-38 ENSMUST00000110849.9:-43 ENSMUST00000194395.5:-43 AK135612:-43 AK155440:-43 ENSMUST00000193322.1:-57 ENSMUST00000192491.5:-59 AK040839:-59 AK050287:-63 ENSMUST00000192158.5:-64 ENSMUST00000194493.1:-68 ENSMUST00000073279.12:-73 NM_001290282:-73 NM_001346740:-73 NM_001290278:-73 NM_144814:-73 NM_001290280:-73 NM_001290279:-73 ENSMUST00000192866.5:-95 BC057141:169 AK203210:189 BC138938:196 BC138939:196 BC145469:196 ENSMUST00000193144.1:296 |
TATA-Box annotation
| Distance to TSS: | 79 |
|---|---|
| Nearest PromoterID: | NM_001290280 |
| Entrez ID: | 214742 |
| Nearest Unigene: | Mm.207457 |
| Nearest Refseq: | NM_144814 |
| Nearest Ensembl: | ENSMUSG00000037395 |
| Gene Name: | REST corepressor 3 |
| Gene Alias: | 4921514E24Rik|C730034D20Rik|E130101E15Rik |
| Gene Description: | REST corepressor 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
