Difference between revisions of "TSS:Mm 100345.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Apy1h= | ||
| + | |D11Bwg0554e= | ||
| + | |Entpd8= | ||
| + | |SCAN-1= | ||
| + | |Shapy= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-119 | |distance_to_tss=-119 | ||
|end=118419251 | |end=118419251 | ||
| + | |end_of_center_position=118419238 | ||
|entrez_id=76025 | |entrez_id=76025 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=5830420C20Rik | + | |gene_alias=5830420C20Rik{{!}}Apy1h{{!}}D11Bwg0554e{{!}}Entpd8{{!}}SCAN-1{{!}}Shapy |
|gene_description=calcium activated nucleotidase 1 | |gene_description=calcium activated nucleotidase 1 | ||
|gene_name=Cant1 | |gene_name=Cant1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000025575 | |nearest_ensembl=ENSMUSG00000025575 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001025617 |
|nearest_refseq=NM_029502 | |nearest_refseq=NM_029502 | ||
|nearest_unigene=Mm.177551 | |nearest_unigene=Mm.177551 | ||
| Line 18: | Line 24: | ||
|species=mouse | |species=mouse | ||
|start=118419223 | |start=118419223 | ||
| + | |start_of_center_position=118419237 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:14, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 118419237 |
|---|---|
| End of the center position in the TSS region: | 118419238 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -119 |
|---|---|
| Nearest PromoterID: | NM_001025617 |
| Entrez ID: | 76025 |
| Nearest Unigene: | Mm.177551 |
| Nearest Refseq: | NM_029502 |
| Nearest Ensembl: | ENSMUSG00000025575 |
| Gene Name: | Cant1 |
| Gene Alias: | 5830420C20Rik|Apy1h|D11Bwg0554e|Entpd8|SCAN-1|Shapy |
| Gene Description: | calcium activated nucleotidase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
