Difference between revisions of "TSS:Mm 100346.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CTRP1= | |CTRP1= | ||
|Zsig37= | |Zsig37= | ||
| − | |all_trans=ENSMUST00000124861.1:62 NM_001204129 | + | |all_trans=ENSMUST00000124861.1:62 NM_001204129:316 ENSMUST00000017590.8:358 AK005484:358 BC049894:375 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 11: | Line 11: | ||
|entrez_id=56745 | |entrez_id=56745 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=1600017K21Rik | + | |gene_alias=1600017K21Rik{{!}}Adip{{!}}CTRP1{{!}}Zsig37 |
|gene_description=C1q and tumor necrosis factor related protein 1 | |gene_description=C1q and tumor necrosis factor related protein 1 | ||
|gene_id=56745 | |gene_id=56745 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_019959 | |nearest_refseq=NM_019959 | ||
|nearest_unigene=Mm.23845 | |nearest_unigene=Mm.23845 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=118428115 | |start=118428115 | ||
Revision as of 16:14, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 118428128 |
|---|---|
| End of the center position in the TSS region: | 118428129 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000124861.1 |
|---|---|
| Distance: | 62 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000124861.1:62 NM_001204129:316 ENSMUST00000017590.8:358 AK005484:358 BC049894:375 |
TATA-Box annotation
| Distance to TSS: | -329 |
|---|---|
| Nearest PromoterID: | NM_001204129 |
| Entrez ID: | 56745 |
| Nearest Unigene: | Mm.23845 |
| Nearest Refseq: | NM_019959 |
| Nearest Ensembl: | ENSMUSG00000017446 |
| Gene Name: | C1q and tumor necrosis factor related protein 1 |
| Gene Alias: | 1600017K21Rik|Adip|CTRP1|Zsig37 |
| Gene Description: | C1q and tumor necrosis factor related protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
