Difference between revisions of "TSS:Mm 10036.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|C130018M11Rik= | |C130018M11Rik= | ||
| − | |all_trans=ENSMUST00000125391.1:88 BC060251:-115 NM_198247 | + | |all_trans=ENSMUST00000125391.1:88 BC060251:-115 NM_198247:-146 ENSMUST00000155579.7:-150 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| Line 10: | Line 10: | ||
|entrez_id=214791 | |entrez_id=214791 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=4833404A09 | + | |gene_alias=4833404A09{{!}}C130018M11Rik |
|gene_description=SERTA domain containing 4 | |gene_description=SERTA domain containing 4 | ||
|gene_id=214791 | |gene_id=214791 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_198247 | |nearest_refseq=NM_198247 | ||
|nearest_unigene=Mm.22806 | |nearest_unigene=Mm.22806 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=192855573 | |start=192855573 | ||
Revision as of 16:15, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 192855589 |
|---|---|
| End of the center position in the TSS region: | 192855590 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000125391.1 |
|---|---|
| Distance: | 88 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000125391.1:88 BC060251:-115 NM_198247:-146 ENSMUST00000155579.7:-150 |
TATA-Box annotation
| Distance to TSS: | 162 |
|---|---|
| Nearest PromoterID: | NM_198247 |
| Entrez ID: | 214791 |
| Nearest Unigene: | Mm.22806 |
| Nearest Refseq: | NM_198247 |
| Nearest Ensembl: | ENSMUSG00000016262 |
| Gene Name: | SERTA domain containing 4 |
| Gene Alias: | 4833404A09|C130018M11Rik |
| Gene Description: | SERTA domain containing 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
