Difference between revisions of "TSS:Mm 100360.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|D230014K01Rik= | |D230014K01Rik= | ||
| − | |all_trans=ENSMUST00000135383.8:0 ENSMUST00000172279.7:111 ENSMUST00000166995.7:116 ENSMUST00000171769.7 | + | |all_trans=ENSMUST00000135383.8:0 NM_172573:2 NR_153103:2 NM_001359368:2 ENSMUST00000172279.7:111 ENSMUST00000166995.7:116 ENSMUST00000171769.7:130 BC120923:130 BC120924:130 AK048667:130 ENSMUST00000043447.9:142 AK084254:142 ENSMUST00000139917.8:153 BC060640:153 AK167142:158 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-5 |
|end=118476830 | |end=118476830 | ||
|end_of_center_position=118476828 | |end_of_center_position=118476828 | ||
|entrez_id=217364 | |entrez_id=217364 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=C130099A03 | + | |gene_alias=C130099A03{{!}}D230014K01Rik |
|gene_description=endo-beta-N-acetylglucosaminidase | |gene_description=endo-beta-N-acetylglucosaminidase | ||
|gene_id=217364 | |gene_id=217364 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_172573 | |nearest_refseq=NM_172573 | ||
|nearest_unigene=Mm.473963 | |nearest_unigene=Mm.473963 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=118476824 | |start=118476824 | ||
Revision as of 16:15, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 118476827 |
|---|---|
| End of the center position in the TSS region: | 118476828 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000135383.8 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000135383.8:0 NM_172573:2 NR_153103:2 NM_001359368:2 ENSMUST00000172279.7:111 ENSMUST00000166995.7:116 ENSMUST00000171769.7:130 BC120923:130 BC120924:130 AK048667:130 ENSMUST00000043447.9:142 AK084254:142 ENSMUST00000139917.8:153 BC060640:153 AK167142:158 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_172573 |
| Entrez ID: | 217364 |
| Nearest Unigene: | Mm.473963 |
| Nearest Refseq: | NM_172573 |
| Nearest Ensembl: | ENSMUSG00000033857 |
| Gene Name: | endo-beta-N-acetylglucosaminidase |
| Gene Alias: | C130099A03|D230014K01Rik |
| Gene Description: | endo-beta-N-acetylglucosaminidase |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
