Difference between revisions of "TSS:Mm 100361.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|D230014K01Rik= | |D230014K01Rik= | ||
| − | |all_trans=ENSMUST00000172279.7:0 ENSMUST00000166995.7:0 ENSMUST00000171769.7:0 ENSMUST00000043447.9:0 ENSMUST00000139917.8 | + | |all_trans=ENSMUST00000172279.7:0 ENSMUST00000166995.7:0 ENSMUST00000171769.7:0 ENSMUST00000043447.9:0 ENSMUST00000139917.8:0 BC120923:0 BC120924:0 AK048667:0 AK084254:0 BC060640:0 AK167142:0 NM_172573:-103 NR_153103:-103 NM_001359368:-103 ENSMUST00000135383.8:-106 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=132 |
|end=118476994 | |end=118476994 | ||
|end_of_center_position=118476965 | |end_of_center_position=118476965 | ||
|entrez_id=217364 | |entrez_id=217364 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=C130099A03 | + | |gene_alias=C130099A03{{!}}D230014K01Rik |
|gene_description=endo-beta-N-acetylglucosaminidase | |gene_description=endo-beta-N-acetylglucosaminidase | ||
|gene_id=217364 | |gene_id=217364 | ||
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|hgnc_mgi_id=MGI:2443788 | |hgnc_mgi_id=MGI:2443788 | ||
|nearest_ensembl=ENSMUSG00000033857 | |nearest_ensembl=ENSMUSG00000033857 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001359368 |
|nearest_refseq=NM_172573 | |nearest_refseq=NM_172573 | ||
|nearest_unigene=Mm.473963 | |nearest_unigene=Mm.473963 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=118476934 | |start=118476934 | ||
|start_of_center_position=118476964 | |start_of_center_position=118476964 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000172279.7 ENSMUST00000166995.7 ENSMUST00000171769.7 ENSMUST00000043447.9 ENSMUST00000139917.8 | + | |transcript_name=ENSMUST00000172279.7 ENSMUST00000166995.7 ENSMUST00000171769.7 ENSMUST00000043447.9 ENSMUST00000139917.8 BC120923 BC120924 AK048667 AK084254 BC060640 AK167142 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100361.1 | |tss_id=mm_100361.1 | ||
Revision as of 16:15, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 118476964 |
|---|---|
| End of the center position in the TSS region: | 118476965 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000172279.7 ENSMUST00000166995.7 ENSMUST00000171769.7 ENSMUST00000043447.9 ENSMUST00000139917.8 BC120923 BC120924 AK048667 AK084254 BC060640 AK167142 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000172279.7:0 ENSMUST00000166995.7:0 ENSMUST00000171769.7:0 ENSMUST00000043447.9:0 ENSMUST00000139917.8:0 BC120923:0 BC120924:0 AK048667:0 AK084254:0 BC060640:0 AK167142:0 NM_172573:-103 NR_153103:-103 NM_001359368:-103 ENSMUST00000135383.8:-106 |
TATA-Box annotation
| Distance to TSS: | 132 |
|---|---|
| Nearest PromoterID: | NM_001359368 |
| Entrez ID: | 217364 |
| Nearest Unigene: | Mm.473963 |
| Nearest Refseq: | NM_172573 |
| Nearest Ensembl: | ENSMUSG00000033857 |
| Gene Name: | endo-beta-N-acetylglucosaminidase |
| Gene Alias: | C130099A03|D230014K01Rik |
| Gene Description: | endo-beta-N-acetylglucosaminidase |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
