Difference between revisions of "TSS:Mm 100364.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Gm254= | |Gm254= | ||
| − | |all_trans=ENSMUST00000092373.12:0 | + | |all_trans=ENSMUST00000092373.12:0 NM_001359574:0 AK144474:0 AK167678:0 ENSMUST00000106273.2:24 BC156164:24 BC157003:24 BC171967:-71 BC141245:-71 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2 |
|end=118988192 | |end=118988192 | ||
|end_of_center_position=118988183 | |end_of_center_position=118988183 | ||
|entrez_id=238011 | |entrez_id=238011 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=Alk-SMase | + | |gene_alias=Alk-SMase{{!}}Gm254 |
|gene_description=ectonucleotide pyrophosphatase/phosphodiesterase 7 | |gene_description=ectonucleotide pyrophosphatase/phosphodiesterase 7 | ||
|gene_id=238011 | |gene_id=238011 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:3027917 | |hgnc_mgi_id=MGI:3027917 | ||
|nearest_ensembl=ENSMUSG00000046697 | |nearest_ensembl=ENSMUSG00000046697 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001359574 |
|nearest_refseq=NM_001030291 | |nearest_refseq=NM_001030291 | ||
|nearest_unigene=Mm.244114 | |nearest_unigene=Mm.244114 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=118988173 | |start=118988173 | ||
|start_of_center_position=118988182 | |start_of_center_position=118988182 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000092373.12 | + | |transcript_name=ENSMUST00000092373.12 NM_001359574 AK144474 AK167678 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_100364.1 | |tss_id=mm_100364.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=D3Z6V6 | + | |uniprot_id=D3Z6V6 |
}} | }} | ||
Revision as of 16:15, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 118988182 |
|---|---|
| End of the center position in the TSS region: | 118988183 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000092373.12 NM_001359574 AK144474 AK167678 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000092373.12:0 NM_001359574:0 AK144474:0 AK167678:0 ENSMUST00000106273.2:24 BC156164:24 BC157003:24 BC171967:-71 BC141245:-71 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001359574 |
| Entrez ID: | 238011 |
| Nearest Unigene: | Mm.244114 |
| Nearest Refseq: | NM_001030291 |
| Nearest Ensembl: | ENSMUSG00000046697 |
| Gene Name: | ectonucleotide pyrophosphatase/phosphodiesterase 7 |
| Gene Alias: | Alk-SMase|Gm254 |
| Gene Description: | ectonucleotide pyrophosphatase/phosphodiesterase 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
