Difference between revisions of "TSS:Mm 100371.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-3150 | |distance_to_tss=-3150 | ||
|end=119089388 | |end=119089388 | ||
| Line 9: | Line 9: | ||
|entrez_id=12418 | |entrez_id=12418 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=MPc2 | + | |gene_alias=MPc2{{!}}PC2 |
|gene_description=chromobox 4 | |gene_description=chromobox 4 | ||
|gene_name=Cbx4 | |gene_name=Cbx4 | ||
| Line 22: | Line 22: | ||
|start_of_center_position=119089386 | |start_of_center_position=119089386 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-87(ACCTTTATAAGA,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 16:15, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119089386 |
|---|---|
| End of the center position in the TSS region: | 119089387 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -3150 |
|---|---|
| Nearest PromoterID: | NM_007625 |
| Entrez ID: | 12418 |
| Nearest Unigene: | Mm.268070 |
| Nearest Refseq: | NM_007625 |
| Nearest Ensembl: | ENSMUSG00000039989 |
| Gene Name: | Cbx4 |
| Gene Alias: | MPc2|PC2 |
| Gene Description: | chromobox 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -87(ACCTTTATAAGA,-,0.00) |
