Difference between revisions of "TSS:Mm 100376.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NM_001159324:0 NM_008064:0 AK146538:6 ENSMUST00000026666.12:58 U49351:58 ENSMUST00000106258.1:60 AK054057:60 AK141546:60 AK052211:60 AK088481:65 ENSMUST00000106259.8:-71 AK140042:74 BC010210:76 AK207669:82 AK150970:83 AK139333:92 AK204687:96 AK197627:170 AK177279:178 AK179414:178 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=E430018M07Rik | |gene_alias=E430018M07Rik | ||
| − | |gene_description= | + | |gene_description=glucosidase, alpha, acid |
|gene_id=14387 | |gene_id=14387 | ||
| − | |gene_name= | + | |gene_name=glucosidase, alpha, acid |
|gene_source=MGI:95609 | |gene_source=MGI:95609 | ||
|gene_symbol=Gaa | |gene_symbol=Gaa | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:95609 | |hgnc_mgi_id=MGI:95609 | ||
|nearest_ensembl=ENSMUSG00000025579 | |nearest_ensembl=ENSMUSG00000025579 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_008064 |
|nearest_refseq=NM_008064 | |nearest_refseq=NM_008064 | ||
|nearest_unigene=Mm.4793 | |nearest_unigene=Mm.4793 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=mouse | |species=mouse | ||
|start=119267957 | |start=119267957 | ||
|start_of_center_position=119267962 | |start_of_center_position=119267962 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_008064 | + | |transcript_name=NM_001159324 NM_008064 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100376.1 | |tss_id=mm_100376.1 | ||
Revision as of 16:15, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 119267962 |
|---|---|
| End of the center position in the TSS region: | 119267963 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001159324 NM_008064 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | NM_001159324:0 NM_008064:0 AK146538:6 ENSMUST00000026666.12:58 U49351:58 ENSMUST00000106258.1:60 AK054057:60 AK141546:60 AK052211:60 AK088481:65 ENSMUST00000106259.8:-71 AK140042:74 BC010210:76 AK207669:82 AK150970:83 AK139333:92 AK204687:96 AK197627:170 AK177279:178 AK179414:178 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_008064 |
| Entrez ID: | 14387 |
| Nearest Unigene: | Mm.4793 |
| Nearest Refseq: | NM_008064 |
| Nearest Ensembl: | ENSMUSG00000025579 |
| Gene Name: | glucosidase, alpha, acid |
| Gene Alias: | E430018M07Rik |
| Gene Description: | glucosidase, alpha, acid |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
