Difference between revisions of "TSS:Mm 100377.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000026666.12:0 ENSMUST00000106258.1 | + | |all_trans=ENSMUST00000026666.12:0 ENSMUST00000106258.1:0 U49351:0 AK054057:0 AK141546:0 AK052211:0 AK088481:0 AK140042:0 BC010210:0 AK207669:0 AK150970:0 AK139333:0 AK204687:0 AK146538:-31 AK197627:39 NM_001159324:-42 NM_008064:-42 AK177279:47 AK179414:47 ENSMUST00000106259.8:-118 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
|gene_alias=E430018M07Rik | |gene_alias=E430018M07Rik | ||
| − | |gene_description= | + | |gene_description=glucosidase, alpha, acid |
|gene_id=14387 | |gene_id=14387 | ||
| − | |gene_name= | + | |gene_name=glucosidase, alpha, acid |
|gene_source=MGI:95609 | |gene_source=MGI:95609 | ||
|gene_symbol=Gaa | |gene_symbol=Gaa | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:95609 | |hgnc_mgi_id=MGI:95609 | ||
|nearest_ensembl=ENSMUSG00000025579 | |nearest_ensembl=ENSMUSG00000025579 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001159324 |
|nearest_refseq=NM_008064 | |nearest_refseq=NM_008064 | ||
|nearest_unigene=Mm.4793 | |nearest_unigene=Mm.4793 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=mouse | |species=mouse | ||
|start=119268004 | |start=119268004 | ||
|start_of_center_position=119268051 | |start_of_center_position=119268051 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000026666.12 ENSMUST00000106258.1 | + | |transcript_name=ENSMUST00000026666.12 ENSMUST00000106258.1 U49351 AK054057 AK141546 AK052211 AK088481 AK140042 BC010210 AK207669 AK150970 AK139333 AK204687 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100377.1 | |tss_id=mm_100377.1 | ||
Revision as of 16:15, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119268051 |
|---|---|
| End of the center position in the TSS region: | 119268052 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000026666.12 ENSMUST00000106258.1 U49351 AK054057 AK141546 AK052211 AK088481 AK140042 BC010210 AK207669 AK150970 AK139333 AK204687 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENSMUST00000026666.12:0 ENSMUST00000106258.1:0 U49351:0 AK054057:0 AK141546:0 AK052211:0 AK088481:0 AK140042:0 BC010210:0 AK207669:0 AK150970:0 AK139333:0 AK204687:0 AK146538:-31 AK197627:39 NM_001159324:-42 NM_008064:-42 AK177279:47 AK179414:47 ENSMUST00000106259.8:-118 |
TATA-Box annotation
| Distance to TSS: | 89 |
|---|---|
| Nearest PromoterID: | NM_001159324 |
| Entrez ID: | 14387 |
| Nearest Unigene: | Mm.4793 |
| Nearest Refseq: | NM_008064 |
| Nearest Ensembl: | ENSMUSG00000025579 |
| Gene Name: | glucosidase, alpha, acid |
| Gene Alias: | E430018M07Rik |
| Gene Description: | glucosidase, alpha, acid |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
