Difference between revisions of "TSS:Mm 100378.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK215472:-44 AK196036:105 AK145631:276 ENSMUST00000128753.1:334 |chr=chr11 |cpg_percent=0.03 |distance=-44 |distance_to_tss=2211 |end=119270182 |entrez_...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=2211 | |distance_to_tss=2211 | ||
|end=119270182 | |end=119270182 | ||
| + | |end_of_center_position=119270174 | ||
|entrez_id=14387 | |entrez_id=14387 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
|gene_alias=E430018M07Rik | |gene_alias=E430018M07Rik | ||
| − | |gene_description= | + | |gene_description=glucosidase, alpha, acid |
|gene_name=Gaa | |gene_name=Gaa | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000025579 | |nearest_ensembl=ENSMUSG00000025579 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001159324 |
|nearest_refseq=NM_008064 | |nearest_refseq=NM_008064 | ||
|nearest_unigene=Mm.4793 | |nearest_unigene=Mm.4793 | ||
| Line 19: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=119270165 | |start=119270165 | ||
| + | |start_of_center_position=119270173 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK215472 | |transcript_name=AK215472 | ||
Latest revision as of 16:15, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119270173 |
|---|---|
| End of the center position in the TSS region: | 119270174 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK215472 |
|---|---|
| Distance: | -44 |
| Num_trans: | 4 |
| All_trans: | AK215472:-44 AK196036:105 AK145631:276 ENSMUST00000128753.1:334 |
TATA-Box annotation
| Distance to TSS: | 2211 |
|---|---|
| Nearest PromoterID: | NM_001159324 |
| Entrez ID: | 14387 |
| Nearest Unigene: | Mm.4793 |
| Nearest Refseq: | NM_008064 |
| Nearest Ensembl: | ENSMUSG00000025579 |
| Gene Name: | Gaa |
| Gene Alias: | E430018M07Rik |
| Gene Description: | glucosidase, alpha, acid |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
