Difference between revisions of "TSS:Mm 100382.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|CARMA2= | |CARMA2= | ||
| − | |all_trans=ENSMUST00000106250.7:0 AK086176:0 | + | |all_trans=ENSMUST00000106250.7:0 NM_130886:0 AK086176:0 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-1 |
|end=119307769 | |end=119307769 | ||
|end_of_center_position=119307767 | |end_of_center_position=119307767 | ||
|entrez_id=170720 | |entrez_id=170720 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=Bimp2 | + | |gene_alias=Bimp2{{!}}CARMA2 |
| − | |gene_description= | + | |gene_description=caspase recruitment domain family, member 14 |
|gene_id=170720 | |gene_id=170720 | ||
| − | |gene_name= | + | |gene_name=caspase recruitment domain family, member 14 |
|gene_source=MGI:2386258 | |gene_source=MGI:2386258 | ||
|gene_symbol=Card14 | |gene_symbol=Card14 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_130886 | |nearest_refseq=NM_130886 | ||
|nearest_unigene=Mm.130832 | |nearest_unigene=Mm.130832 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=119307764 | |start=119307764 | ||
|start_of_center_position=119307766 | |start_of_center_position=119307766 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-34(TTGTATATAAGG,-,0.00) |
| − | |transcript_name=ENSMUST00000106250.7 AK086176 | + | |transcript_name=ENSMUST00000106250.7 NM_130886 AK086176 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_100382.1 | |tss_id=mm_100382.1 | ||
Revision as of 16:15, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119307766 |
|---|---|
| End of the center position in the TSS region: | 119307767 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000106250.7 NM_130886 AK086176 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000106250.7:0 NM_130886:0 AK086176:0 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_130886 |
| Entrez ID: | 170720 |
| Nearest Unigene: | Mm.130832 |
| Nearest Refseq: | NM_130886 |
| Nearest Ensembl: | ENSMUSG00000013483 |
| Gene Name: | caspase recruitment domain family, member 14 |
| Gene Alias: | Bimp2|CARMA2 |
| Gene Description: | caspase recruitment domain family, member 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(TTGTATATAAGG,-,0.00) |
