Difference between revisions of "TSS:Mm 100421.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.005 |distance= |distance_to_tss=50436 |end=119440916 |entrez_id=100316690 |gc_percent=0.437811 |gene_alias=mir-1932|mmu-mir-1932 |gene_de...") |
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|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=50327 |
|end=119440916 | |end=119440916 | ||
| − | |entrez_id= | + | |end_of_center_position=119440909 |
| + | |entrez_id=78439 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias= | + | |gene_alias=Gm44935 |
| − | |gene_description= | + | |gene_description=RIKEN cDNA A930037H05 gene |
| − | |gene_name= | + | |gene_name=A930037H05Rik |
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |mmu-mir-1932= |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSMUSG00000109408 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NR_153849 |
| − | |nearest_unigene= | + | |nearest_refseq=NR_153849 |
| + | |nearest_unigene=Mm.440446 | ||
|num_trans=0 | |num_trans=0 | ||
|species=mouse | |species=mouse | ||
|start=119440900 | |start=119440900 | ||
| + | |start_of_center_position=119440908 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:16, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119440908 |
|---|---|
| End of the center position in the TSS region: | 119440909 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 50327 |
|---|---|
| Nearest PromoterID: | NR_153849 |
| Entrez ID: | 78439 |
| Nearest Unigene: | Mm.440446 |
| Nearest Refseq: | NR_153849 |
| Nearest Ensembl: | ENSMUSG00000109408 |
| Gene Name: | A930037H05Rik |
| Gene Alias: | Gm44935 |
| Gene Description: | RIKEN cDNA A930037H05 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
