Difference between revisions of "TSS:Mm 10043.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000195354.5:0 NM_181546:0 NM_001301370 | + | |all_trans=ENSMUST00000215093.1:0 ENSMUST00000195354.5:0 NM_181546:0 NM_001301370:0 AK045901:0 ENSMUST00000016344.8:40 BC141262:40 BC145602:40 AB102947:59 ENSMUST00000195530.5:95 ENSMUST00000191907.1:113 AK051175:113 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 9: | Line 9: | ||
|entrez_id=329324 | |entrez_id=329324 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| − | |gene_alias=B230320I09Rik | + | |gene_alias=B230320I09Rik{{!}}sytXIV |
|gene_description=synaptotagmin XIV | |gene_description=synaptotagmin XIV | ||
|gene_id=329324 | |gene_id=329324 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_181546 | |nearest_refseq=NM_181546 | ||
|nearest_unigene=Mm.76710 | |nearest_unigene=Mm.76710 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=mouse | |species=mouse | ||
|start=193035756 | |start=193035756 | ||
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|sytXIV= | |sytXIV= | ||
| − | |transcript_name=ENSMUST00000195354.5 NM_181546 NM_001301370 | + | |transcript_name=ENSMUST00000215093.1 ENSMUST00000195354.5 NM_181546 NM_001301370 AK045901 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_10043.1 | |tss_id=mm_10043.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A1L1SVE7 Q7TN84 Q8BL96 |
}} | }} | ||
Revision as of 16:16, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 193035793 |
|---|---|
| End of the center position in the TSS region: | 193035794 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000215093.1 ENSMUST00000195354.5 NM_181546 NM_001301370 AK045901 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000215093.1:0 ENSMUST00000195354.5:0 NM_181546:0 NM_001301370:0 AK045901:0 ENSMUST00000016344.8:40 BC141262:40 BC145602:40 AB102947:59 ENSMUST00000195530.5:95 ENSMUST00000191907.1:113 AK051175:113 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_181546 |
| Entrez ID: | 329324 |
| Nearest Unigene: | Mm.76710 |
| Nearest Refseq: | NM_181546 |
| Nearest Ensembl: | ENSMUSG00000016200 |
| Gene Name: | synaptotagmin XIV |
| Gene Alias: | B230320I09Rik|sytXIV |
| Gene Description: | synaptotagmin XIV |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
