Difference between revisions of "TSS:Mm 100446.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000106245.8:0 NM_177394 | + | |all_trans=ENSMUST00000106245.8:0 NM_177394:0 AK170595:0 AK172181:0 ENSMUST00000143670.1:16 BC056486:40 ENSMUST00000154370.7:-68 AK042626:73 ENSMUST00000134873.8:125 ENSMUST00000140323.8:-193 ENSMUST00000129327.8:-230 ENSMUST00000143817.7:-244 AK084548:-244 ENSMUST00000153204.8:-245 ENSMUST00000106244.8:-272 NM_001164636:-272 AK084233:-272 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_177394 | |nearest_refseq=NM_177394 | ||
|nearest_unigene=Mm.271946 | |nearest_unigene=Mm.271946 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=mouse | |species=mouse | ||
|start=119491618 | |start=119491618 | ||
|start_of_center_position=119491639 | |start_of_center_position=119491639 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000106245.8 NM_177394 | + | |transcript_name=ENSMUST00000106245.8 NM_177394 AK170595 AK172181 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100446.1 | |tss_id=mm_100446.1 | ||
Revision as of 16:17, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119491639 |
|---|---|
| End of the center position in the TSS region: | 119491640 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000106245.8 NM_177394 AK170595 AK172181 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000106245.8:0 NM_177394:0 AK170595:0 AK172181:0 ENSMUST00000143670.1:16 BC056486:40 ENSMUST00000154370.7:-68 AK042626:73 ENSMUST00000134873.8:125 ENSMUST00000140323.8:-193 ENSMUST00000129327.8:-230 ENSMUST00000143817.7:-244 AK084548:-244 ENSMUST00000153204.8:-245 ENSMUST00000106244.8:-272 NM_001164636:-272 AK084233:-272 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_177394 |
| Entrez ID: | 338371 |
| Nearest Unigene: | Mm.271946 |
| Nearest Refseq: | NM_177394 |
| Nearest Ensembl: | ENSMUSG00000039850 |
| Gene Name: | endonuclease V |
| Gene Alias: | A730011L01Rik |
| Gene Description: | endonuclease V |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
