Difference between revisions of "TSS:Mm 100447.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000143670.1:0 AK172181:-6 BC056486:21 ENSMUST00000106245.8:-33 AK170595:-33 NM_177394 | + | |all_trans=ENSMUST00000143670.1:0 AK172181:-6 BC056486:21 ENSMUST00000106245.8:-33 AK170595:-33 NM_177394:-43 AK042626:54 ENSMUST00000134873.8:106 ENSMUST00000154370.7:-112 ENSMUST00000140323.8:-237 ENSMUST00000129327.8:-274 ENSMUST00000143817.7:-288 AK084548:-288 ENSMUST00000153204.8:-289 ENSMUST00000106244.8:-316 NM_001164636:-316 AK084233:-316 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_177394 | |nearest_refseq=NM_177394 | ||
|nearest_unigene=Mm.271946 | |nearest_unigene=Mm.271946 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=mouse | |species=mouse | ||
|start=119491662 | |start=119491662 | ||
Revision as of 16:17, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119491670 |
|---|---|
| End of the center position in the TSS region: | 119491671 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000143670.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000143670.1:0 AK172181:-6 BC056486:21 ENSMUST00000106245.8:-33 AK170595:-33 NM_177394:-43 AK042626:54 ENSMUST00000134873.8:106 ENSMUST00000154370.7:-112 ENSMUST00000140323.8:-237 ENSMUST00000129327.8:-274 ENSMUST00000143817.7:-288 AK084548:-288 ENSMUST00000153204.8:-289 ENSMUST00000106244.8:-316 NM_001164636:-316 AK084233:-316 |
TATA-Box annotation
| Distance to TSS: | 51 |
|---|---|
| Nearest PromoterID: | NM_177394 |
| Entrez ID: | 338371 |
| Nearest Unigene: | Mm.271946 |
| Nearest Refseq: | NM_177394 |
| Nearest Ensembl: | ENSMUSG00000039850 |
| Gene Name: | endonuclease V |
| Gene Alias: | A730011L01Rik |
| Gene Description: | endonuclease V |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
