Difference between revisions of "TSS:Mm 10045.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AW045375= | |AW045375= | ||
|Def= | |Def= | ||
| − | |all_trans=ENSMUST00000085555.6:-1 NM_145415:8 | + | |all_trans=NR_151719:0 ENSMUST00000085555.6:-1 NM_145415:8 NM_001368819:8 AK052355:8 ENSMUST00000195291.5:15 AK147251:15 AK088756:15 ENSMUST00000195848.1:52 BC019218:58 NM_001368818:276 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=5 |
|end=193130271 | |end=193130271 | ||
|end_of_center_position=193130265 | |end_of_center_position=193130265 | ||
|entrez_id=215193 | |entrez_id=215193 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=AA408296 | + | |gene_alias=AA408296{{!}}AW045375{{!}}Def{{!}}Diexf |
| − | |gene_description= | + | |gene_description=UTP25 small subunit processome component |
|gene_id=215193 | |gene_id=215193 | ||
| − | |gene_name= | + | |gene_name=UTP25 small subunit processome component |
|gene_source=MGI:2138080 | |gene_source=MGI:2138080 | ||
| − | |gene_symbol= | + | |gene_symbol=Utp25 |
| − | |gene_synonyms=AA408296 | + | |gene_synonyms=AA408296 Diexf |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2138080 | |hgnc_mgi_id=MGI:2138080 | ||
|nearest_ensembl=ENSMUSG00000016181 | |nearest_ensembl=ENSMUSG00000016181 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_151719 |
|nearest_refseq=NM_145415 | |nearest_refseq=NM_145415 | ||
|nearest_unigene=Mm.173758 | |nearest_unigene=Mm.173758 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=193130258 | |start=193130258 | ||
|start_of_center_position=193130264 | |start_of_center_position=193130264 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NR_151719 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_10045.1 | |tss_id=mm_10045.1 | ||
Revision as of 16:17, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 193130264 |
|---|---|
| End of the center position in the TSS region: | 193130265 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_151719 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | NR_151719:0 ENSMUST00000085555.6:-1 NM_145415:8 NM_001368819:8 AK052355:8 ENSMUST00000195291.5:15 AK147251:15 AK088756:15 ENSMUST00000195848.1:52 BC019218:58 NM_001368818:276 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NR_151719 |
| Entrez ID: | 215193 |
| Nearest Unigene: | Mm.173758 |
| Nearest Refseq: | NM_145415 |
| Nearest Ensembl: | ENSMUSG00000016181 |
| Gene Name: | UTP25 small subunit processome component |
| Gene Alias: | AA408296|AW045375|Def|Diexf |
| Gene Description: | UTP25 small subunit processome component |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
