Difference between revisions of "TSS:Mm 100482.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|BC060615= | |BC060615= | ||
| − | |all_trans=ENSMUST00000122148.7:-12 ENSMUST00000044985.13:-12 | + | |all_trans=ENSMUST00000122148.7:-12 ENSMUST00000044985.13:-12 NM_001347621:-12 AK147250:-12 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 10: | Line 10: | ||
|entrez_id=268515 | |entrez_id=268515 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=B930044J06 | + | |gene_alias=B930044J06{{!}}BC060615 |
|gene_description=BAH domain and coiled-coil containing 1 | |gene_description=BAH domain and coiled-coil containing 1 | ||
|gene_id=268515 | |gene_id=268515 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:2679272 | |hgnc_mgi_id=MGI:2679272 | ||
|nearest_ensembl=ENSMUSG00000039741 | |nearest_ensembl=ENSMUSG00000039741 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001347621 |
|nearest_refseq=NM_198423 | |nearest_refseq=NM_198423 | ||
|nearest_unigene=Mm.309498 | |nearest_unigene=Mm.309498 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=120232958 | |start=120232958 | ||
|start_of_center_position=120232969 | |start_of_center_position=120232969 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000122148.7 ENSMUST00000044985.13 | + | |transcript_name=ENSMUST00000122148.7 ENSMUST00000044985.13 NM_001347621 AK147250 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100482.1 | |tss_id=mm_100482.1 | ||
Revision as of 16:17, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120232969 |
|---|---|
| End of the center position in the TSS region: | 120232970 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000122148.7 ENSMUST00000044985.13 NM_001347621 AK147250 |
|---|---|
| Distance: | -12 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000122148.7:-12 ENSMUST00000044985.13:-12 NM_001347621:-12 AK147250:-12 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_001347621 |
| Entrez ID: | 268515 |
| Nearest Unigene: | Mm.309498 |
| Nearest Refseq: | NM_198423 |
| Nearest Ensembl: | ENSMUSG00000039741 |
| Gene Name: | BAH domain and coiled-coil containing 1 |
| Gene Alias: | B930044J06|BC060615 |
| Gene Description: | BAH domain and coiled-coil containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
