Difference between revisions of "TSS:Mm 100485.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |BC060615= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=20107 | |distance_to_tss=20107 | ||
|end=120253063 | |end=120253063 | ||
| + | |end_of_center_position=120253054 | ||
|entrez_id=268515 | |entrez_id=268515 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=B930044J06 | + | |gene_alias=B930044J06{{!}}BC060615 |
|gene_description=BAH domain and coiled-coil containing 1 | |gene_description=BAH domain and coiled-coil containing 1 | ||
|gene_name=Bahcc1 | |gene_name=Bahcc1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000039741 | |nearest_ensembl=ENSMUSG00000039741 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001347621 |
|nearest_refseq=NM_198423 | |nearest_refseq=NM_198423 | ||
|nearest_unigene=Mm.309498 | |nearest_unigene=Mm.309498 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=120253044 | |start=120253044 | ||
| + | |start_of_center_position=120253053 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-41(CCCTTTAAATGC,+,0.00),-41(CCCTTTAAATGC,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:18, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120253053 |
|---|---|
| End of the center position in the TSS region: | 120253054 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 20107 |
|---|---|
| Nearest PromoterID: | NM_001347621 |
| Entrez ID: | 268515 |
| Nearest Unigene: | Mm.309498 |
| Nearest Refseq: | NM_198423 |
| Nearest Ensembl: | ENSMUSG00000039741 |
| Gene Name: | Bahcc1 |
| Gene Alias: | B930044J06|BC060615 |
| Gene Description: | BAH domain and coiled-coil containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -41(CCCTTTAAATGC,+,0.00),-41(CCCTTTAAATGC,-,0.00) |
