Difference between revisions of "TSS:Mm 100486.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK002420:0 AK005967:0 ENSMUST00000143813.1:-5 NR_038126:-5 | + | |all_trans=AK002420:0 AK005967:0 ENSMUST00000143813.1:-5 NR_038126:-5 LF199022:-6 MA434599:-6 LF231625:299 MA467202:299 LF231626:442 MA467203:442 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_038126 | |nearest_refseq=NR_038126 | ||
|nearest_unigene=Mm.375010 | |nearest_unigene=Mm.375010 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=120348682 | |start=120348682 | ||
Revision as of 16:18, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120348732 |
|---|---|
| End of the center position in the TSS region: | 120348733 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK002420 AK005967 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | AK002420:0 AK005967:0 ENSMUST00000143813.1:-5 NR_038126:-5 LF199022:-6 MA434599:-6 LF231625:299 MA467202:299 LF231626:442 MA467203:442 |
TATA-Box annotation
| Distance to TSS: | 54 |
|---|---|
| Nearest PromoterID: | NR_038126 |
| Entrez ID: | 66838 |
| Nearest Unigene: | Mm.375010 |
| Nearest Refseq: | NR_038126 |
| Nearest Ensembl: | ENSMUSG00000043644 |
| Gene Name: | RIKEN cDNA 0610009L18 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 0610009L18 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.17 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
