Difference between revisions of "TSS:Mm 100488.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Ahl8= | |Ahl8= | ||
|C630046B20Rik= | |C630046B20Rik= | ||
| − | |all_trans=ENSMUST00000026445.2:0 NM_172802 | + | |all_trans=ENSMUST00000026445.2:0 NM_172802:0 AK078674:0 AK050002:0 AK044556:0 BC109356:30 BC109357:30 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 11: | Line 11: | ||
|entrez_id=238021 | |entrez_id=238021 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=A930022G03 | + | |gene_alias=A930022G03{{!}}Ahl8{{!}}C630046B20Rik |
|gene_description=fascin actin-bundling protein 2 | |gene_description=fascin actin-bundling protein 2 | ||
|gene_id=238021 | |gene_id=238021 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_172802 | |nearest_refseq=NM_172802 | ||
|nearest_unigene=Mm.481403 | |nearest_unigene=Mm.481403 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=mouse | |species=mouse | ||
|start=120361506 | |start=120361506 | ||
|start_of_center_position=120361524 | |start_of_center_position=120361524 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000026445.2 NM_172802 | + | |transcript_name=ENSMUST00000026445.2 NM_172802 AK078674 AK050002 AK044556 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100488.1 | |tss_id=mm_100488.1 | ||
Revision as of 16:18, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120361524 |
|---|---|
| End of the center position in the TSS region: | 120361525 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000026445.2 NM_172802 AK078674 AK050002 AK044556 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000026445.2:0 NM_172802:0 AK078674:0 AK050002:0 AK044556:0 BC109356:30 BC109357:30 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NM_172802 |
| Entrez ID: | 238021 |
| Nearest Unigene: | Mm.481403 |
| Nearest Refseq: | NM_172802 |
| Nearest Ensembl: | ENSMUSG00000025380 |
| Gene Name: | fascin actin-bundling protein 2 |
| Gene Alias: | A930022G03|Ahl8|C630046B20Rik |
| Gene Description: | fascin actin-bundling protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
