Difference between revisions of "TSS:Mm 100492.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000058370.13:0 ENSMUST00000150400.7:0 ENSMUST00000140308.1:0 ENSMUST00000175970.7:0 ENSMUST00000176120.1:0 NM_152807:0 | + | |all_trans=ENSMUST00000058370.13:0 ENSMUST00000150400.7:0 ENSMUST00000140308.1:0 ENSMUST00000175970.7:0 ENSMUST00000176120.1:0 NM_152807:0 LF199025:0 MA434602:0 AK156682:0 BC026662:0 ENSMUST00000176717.1:39 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_152807 | |nearest_refseq=NM_152807 | ||
|nearest_unigene=Mm.103384 | |nearest_unigene=Mm.103384 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=120458093 | |start=120458093 | ||
|start_of_center_position=120458120 | |start_of_center_position=120458120 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000058370.13 ENSMUST00000150400.7 ENSMUST00000140308.1 ENSMUST00000175970.7 ENSMUST00000176120.1 NM_152807 | + | |transcript_name=ENSMUST00000058370.13 ENSMUST00000150400.7 ENSMUST00000140308.1 ENSMUST00000175970.7 ENSMUST00000176120.1 NM_152807 LF199025 MA434602 AK156682 BC026662 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100492.1 | |tss_id=mm_100492.1 | ||
Revision as of 16:18, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120458120 |
|---|---|
| End of the center position in the TSS region: | 120458121 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000058370.13 ENSMUST00000150400.7 ENSMUST00000140308.1 ENSMUST00000175970.7 ENSMUST00000176120.1 NM_152807 LF199025 MA434602 AK156682 BC026662 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000058370.13:0 ENSMUST00000150400.7:0 ENSMUST00000140308.1:0 ENSMUST00000175970.7:0 ENSMUST00000176120.1:0 NM_152807:0 LF199025:0 MA434602:0 AK156682:0 BC026662:0 ENSMUST00000176717.1:39 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NM_152807 |
| Entrez ID: | 67291 |
| Nearest Unigene: | Mm.103384 |
| Nearest Refseq: | NM_152807 |
| Nearest Ensembl: | ENSMUSG00000049957 |
| Gene Name: | coiled-coil domain containing 137 |
| Gene Alias: | 3110023B02Rik |
| Gene Description: | coiled-coil domain containing 137 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
