Difference between revisions of "TSS:Mm 10050.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AI115021= | |AI115021= | ||
|T3jam= | |T3jam= | ||
| − | |all_trans=AK036608:-157 ENSMUST00000192020.5:-176 BC036561:-196 ENSMUST00000161403.7:-297 BC096403:-297 AK031400:-326 ENSMUST00000161145.7:-340 ENSMUST00000161151.2:-344 AK080080:-355 ENSMUST00000159805.7:-358 NM_153137 | + | |all_trans=AK036608:-157 ENSMUST00000192020.5:-176 BC036561:-196 ENSMUST00000161403.7:-297 BC096403:-297 AK031400:-326 ENSMUST00000161145.7:-340 ENSMUST00000161151.2:-344 AK080080:-355 ENSMUST00000159805.7:-358 NM_153137:-388 AK041994:-388 ENSMUST00000194278.5:-389 ENSMUST00000043550.10:-389 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 11: | Line 11: | ||
|entrez_id=215243 | |entrez_id=215243 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=6030423D04Rik | + | |gene_alias=6030423D04Rik{{!}}AI115021{{!}}T3jam |
|gene_description=TRAF3 interacting protein 3 | |gene_description=TRAF3 interacting protein 3 | ||
|gene_id=215243 | |gene_id=215243 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_153137 | |nearest_refseq=NM_153137 | ||
|nearest_unigene=Mm.261259 | |nearest_unigene=Mm.261259 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=mouse | |species=mouse | ||
|start=193201137 | |start=193201137 | ||
Revision as of 16:18, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 193201147 |
|---|---|
| End of the center position in the TSS region: | 193201148 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK036608 |
|---|---|
| Distance: | -157 |
| Num_trans: | 14 |
| All_trans: | AK036608:-157 ENSMUST00000192020.5:-176 BC036561:-196 ENSMUST00000161403.7:-297 BC096403:-297 AK031400:-326 ENSMUST00000161145.7:-340 ENSMUST00000161151.2:-344 AK080080:-355 ENSMUST00000159805.7:-358 NM_153137:-388 AK041994:-388 ENSMUST00000194278.5:-389 ENSMUST00000043550.10:-389 |
TATA-Box annotation
| Distance to TSS: | 398 |
|---|---|
| Nearest PromoterID: | NM_153137 |
| Entrez ID: | 215243 |
| Nearest Unigene: | Mm.261259 |
| Nearest Refseq: | NM_153137 |
| Nearest Ensembl: | ENSMUSG00000037318 |
| Gene Name: | TRAF3 interacting protein 3 |
| Gene Alias: | 6030423D04Rik|AI115021|T3jam |
| Gene Description: | TRAF3 interacting protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
