Difference between revisions of "TSS:Mm 100502.1"
From referenceTSS
| Line 3: | Line 3: | ||
|MRP-L12= | |MRP-L12= | ||
|Rpml12= | |Rpml12= | ||
| − | |all_trans=ENSMUST00000137619.1:-6 BC019565:-362 | + | |all_trans=ENSMUST00000137619.1:-6 BC019565:-362 BC005712:-364 AK168337:-366 AK005328:-366 AK028168:-374 AK002757:-374 AK166969:-392 NM_027204:-396 AK134816:-396 ENSMUST00000043627.7:-420 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=-6 | |distance=-6 | ||
| − | |distance_to_tss= | + | |distance_to_tss=404 |
|end=120485049 | |end=120485049 | ||
|end_of_center_position=120485041 | |end_of_center_position=120485041 | ||
|entrez_id=56282 | |entrez_id=56282 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=0610034O11Rik | + | |gene_alias=0610034O11Rik{{!}}1500031N16Rik{{!}}L12mt{{!}}MRP-L12{{!}}Rpml12 |
|gene_description=mitochondrial ribosomal protein L12 | |gene_description=mitochondrial ribosomal protein L12 | ||
|gene_id=56282 | |gene_id=56282 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_027204 | |nearest_refseq=NM_027204 | ||
|nearest_unigene=Mm.133851 | |nearest_unigene=Mm.133851 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=120485032 | |start=120485032 | ||
Revision as of 16:18, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120485040 |
|---|---|
| End of the center position in the TSS region: | 120485041 |
Gene and protein annotation
|
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Transcript annotation
| Transcript_name: | ENSMUST00000137619.1 |
|---|---|
| Distance: | -6 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000137619.1:-6 BC019565:-362 BC005712:-364 AK168337:-366 AK005328:-366 AK028168:-374 AK002757:-374 AK166969:-392 NM_027204:-396 AK134816:-396 ENSMUST00000043627.7:-420 |
TATA-Box annotation
| Distance to TSS: | 404 |
|---|---|
| Nearest PromoterID: | NM_027204 |
| Entrez ID: | 56282 |
| Nearest Unigene: | Mm.133851 |
| Nearest Refseq: | NM_027204 |
| Nearest Ensembl: | ENSMUSG00000039640 |
| Gene Name: | mitochondrial ribosomal protein L12 |
| Gene Alias: | 0610034O11Rik|1500031N16Rik|L12mt|MRP-L12|Rpml12 |
| Gene Description: | mitochondrial ribosomal protein L12 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
