Difference between revisions of "TSS:Mm 100504.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000144706.7:0 AK008038:0 AF188712:0 AK050282:0 AK083831:-5 ENSMUST00000127349.7:20 ENSMUST00000123373.1:26 ENSMUST00000026899.3:-27 NM_013770 | + | |all_trans=ENSMUST00000144706.7:0 AK008038:0 AF188712:0 AK050282:0 AK083831:-5 ENSMUST00000127349.7:20 ENSMUST00000123373.1:26 ENSMUST00000026899.3:-27 NM_013770:-30 AK151645:-30 BC003222:30 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
|gene_alias=Dic | |gene_alias=Dic | ||
| − | |gene_description= | + | |gene_description=solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10 |
|gene_id=27376 | |gene_id=27376 | ||
| − | |gene_name= | + | |gene_name=solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10 |
|gene_source=MGI:1353497 | |gene_source=MGI:1353497 | ||
|gene_symbol=Slc25a10 | |gene_symbol=Slc25a10 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_013770 | |nearest_refseq=NM_013770 | ||
|nearest_unigene=Mm.3991 | |nearest_unigene=Mm.3991 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=120491866 | |start=120491866 | ||
|start_of_center_position=120491877 | |start_of_center_position=120491877 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-91(GCCTCTTTAAGA,-,0.00) |
|transcript_name=ENSMUST00000144706.7 AK008038 AF188712 AK050282 | |transcript_name=ENSMUST00000144706.7 AK008038 AF188712 AK050282 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 16:18, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120491877 |
|---|---|
| End of the center position in the TSS region: | 120491878 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000144706.7 AK008038 AF188712 AK050282 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000144706.7:0 AK008038:0 AF188712:0 AK050282:0 AK083831:-5 ENSMUST00000127349.7:20 ENSMUST00000123373.1:26 ENSMUST00000026899.3:-27 NM_013770:-30 AK151645:-30 BC003222:30 |
TATA-Box annotation
| Distance to TSS: | 41 |
|---|---|
| Nearest PromoterID: | NM_013770 |
| Entrez ID: | 27376 |
| Nearest Unigene: | Mm.3991 |
| Nearest Refseq: | NM_013770 |
| Nearest Ensembl: | ENSMUSG00000025792 |
| Gene Name: | solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10 |
| Gene Alias: | Dic |
| Gene Description: | solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -91(GCCTCTTTAAGA,-,0.00) |
