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Difference between revisions of "TSS:Mm 100512.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000026119.7:165 NM_008101:193 uc011yjd.1:193 uc007mtc.2:193 uc007mtd.2:193 ENSMUST00000147877.7:210 ENSMUST00000128827.7:240 AK004890:240 BC012718:243 AK144393:246 BC031885:255 BC057988:262
+
|all_trans=ENSMUST00000026119.7:165 NM_008101:193 ENSMUST00000147877.7:210 ENSMUST00000128827.7:240 AK004890:240 AK144393:246 BC031885:255 BC057988:262
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.065
 
|cpg_percent=0.065
Line 22: Line 22:
 
|nearest_refseq=NM_008101
 
|nearest_refseq=NM_008101
 
|nearest_unigene=Mm.22329
 
|nearest_unigene=Mm.22329
|num_trans=12
+
|num_trans=8
 
|species=mouse
 
|species=mouse
 
|start=120530520
 
|start=120530520

Revision as of 16:18, 19 June 2021

Basic information about the TSS


TSS ID:mm_100512.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:120530520
End:120530534
Strand:+
TSS Score:1
Start of the center position in the TSS region:120530527
End of the center position in the TSS region:120530528



Gene and protein annotation


Transcript_name:ENSMUST00000026119.7
Distance:165
GeneID:14527
HGNC/MGI_ID:MGI:99572
UniProt_ID:Q61606
Gene_name:glucagon receptor
Gene_symbol:Gcgr
Gene_synonyms:GR
Gene_source:MGI:99572



Transcript annotation


Transcript_name:ENSMUST00000026119.7
Distance:165
Num_trans:8
All_trans:ENSMUST00000026119.7:165 NM_008101:193 ENSMUST00000147877.7:210 ENSMUST00000128827.7:240 AK004890:240 AK144393:246 BC031885:255 BC057988:262



TATA-Box annotation


Distance to TSS:-200
Nearest PromoterID:NM_008101
Entrez ID:14527
Nearest Unigene:Mm.22329
Nearest Refseq:NM_008101
Nearest Ensembl:ENSMUSG00000025127
Gene Name:glucagon receptor
Gene Alias:GR
Gene Description:glucagon receptor
Gene Type:protein-coding
CpG%:0.065
GC%:0.646766
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):