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Difference between revisions of "TSS:Mm 100518.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000147877.7:-7 ENSMUST00000128827.7:10 AK004890:10 BC012718:13 AK144393:16 NM_008101:-24 uc011yjd.1:-24 uc007mtc.2:-24 uc007mtd.2:-24 BC031885:25 BC057988:32 ENSMUST00000026119.7:-52
+
|all_trans=ENSMUST00000147877.7:-7 ENSMUST00000128827.7:10 AK004890:10 AK144393:16 NM_008101:-24 BC031885:25 BC057988:32 ENSMUST00000026119.7:-52
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.15
 
|cpg_percent=0.15
Line 22: Line 22:
 
|nearest_refseq=NM_008101
 
|nearest_refseq=NM_008101
 
|nearest_unigene=Mm.22329
 
|nearest_unigene=Mm.22329
|num_trans=12
+
|num_trans=8
 
|species=mouse
 
|species=mouse
 
|start=120530750
 
|start=120530750

Revision as of 16:18, 19 June 2021

Basic information about the TSS


TSS ID:mm_100518.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:120530750
End:120530764
Strand:+
TSS Score:1
Start of the center position in the TSS region:120530757
End of the center position in the TSS region:120530758



Gene and protein annotation


Transcript_name:ENSMUST00000147877.7
Distance:-7
GeneID:14527
HGNC/MGI_ID:MGI:99572
UniProt_ID:
Gene_name:glucagon receptor
Gene_symbol:Gcgr
Gene_synonyms:GR
Gene_source:MGI:99572



Transcript annotation


Transcript_name:ENSMUST00000147877.7
Distance:-7
Num_trans:8
All_trans:ENSMUST00000147877.7:-7 ENSMUST00000128827.7:10 AK004890:10 AK144393:16 NM_008101:-24 BC031885:25 BC057988:32 ENSMUST00000026119.7:-52



TATA-Box annotation


Distance to TSS:30
Nearest PromoterID:NM_008101
Entrez ID:14527
Nearest Unigene:Mm.22329
Nearest Refseq:NM_008101
Nearest Ensembl:ENSMUSG00000025127
Gene Name:glucagon receptor
Gene Alias:GR
Gene Description:glucagon receptor
Gene Type:protein-coding
CpG%:0.15
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):