Difference between revisions of "TSS:Mm 10052.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AI115021= | |AI115021= | ||
|T3jam= | |T3jam= | ||
| − | |all_trans=ENSMUST00000194278.5:0 ENSMUST00000043550.10:0 ENSMUST00000161403.7:0 ENSMUST00000159805.7:0 ENSMUST00000161145.7:0 ENSMUST00000161151.2:0 NM_153137 | + | |all_trans=ENSMUST00000194278.5:0 ENSMUST00000043550.10:0 ENSMUST00000161403.7:0 ENSMUST00000159805.7:0 ENSMUST00000161145.7:0 ENSMUST00000161151.2:0 NM_153137:0 AK031400:0 AK080080:0 AK041994:0 BC096403:0 BC036561:82 ENSMUST00000192020.5:102 ENSMUST00000162905.1:-119 AK036608:121 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 11: | Line 11: | ||
|entrez_id=215243 | |entrez_id=215243 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=6030423D04Rik | + | |gene_alias=6030423D04Rik{{!}}AI115021{{!}}T3jam |
|gene_description=TRAF3 interacting protein 3 | |gene_description=TRAF3 interacting protein 3 | ||
|gene_id=215243 | |gene_id=215243 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_153137 | |nearest_refseq=NM_153137 | ||
|nearest_unigene=Mm.261259 | |nearest_unigene=Mm.261259 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=193201435 | |start=193201435 | ||
|start_of_center_position=193201509 | |start_of_center_position=193201509 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000194278.5 ENSMUST00000043550.10 ENSMUST00000161403.7 ENSMUST00000159805.7 ENSMUST00000161145.7 ENSMUST00000161151.2 NM_153137 | + | |transcript_name=ENSMUST00000194278.5 ENSMUST00000043550.10 ENSMUST00000161403.7 ENSMUST00000159805.7 ENSMUST00000161145.7 ENSMUST00000161151.2 NM_153137 AK031400 AK080080 AK041994 BC096403 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_10052.1 | |tss_id=mm_10052.1 | ||
Revision as of 16:18, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 193201509 |
|---|---|
| End of the center position in the TSS region: | 193201510 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000194278.5 ENSMUST00000043550.10 ENSMUST00000161403.7 ENSMUST00000159805.7 ENSMUST00000161145.7 ENSMUST00000161151.2 NM_153137 AK031400 AK080080 AK041994 BC096403 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000194278.5:0 ENSMUST00000043550.10:0 ENSMUST00000161403.7:0 ENSMUST00000159805.7:0 ENSMUST00000161145.7:0 ENSMUST00000161151.2:0 NM_153137:0 AK031400:0 AK080080:0 AK041994:0 BC096403:0 BC036561:82 ENSMUST00000192020.5:102 ENSMUST00000162905.1:-119 AK036608:121 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_153137 |
| Entrez ID: | 215243 |
| Nearest Unigene: | Mm.261259 |
| Nearest Refseq: | NM_153137 |
| Nearest Ensembl: | ENSMUSG00000037318 |
| Gene Name: | TRAF3 interacting protein 3 |
| Gene Alias: | 6030423D04Rik|AI115021|T3jam |
| Gene Description: | TRAF3 interacting protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
