Difference between revisions of "TSS:Mm 100524.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.005 |distance= |distance_to_tss=-3972 |end=120576916 |entrez_id=18453 |gc_percent=0.472637 |gene_alias=ERp59|PDI|Pdia1|Thbp |gene_descrip...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PDI= | ||
| + | |Pdia1= | ||
| + | |Thbp= | ||
| + | |all_trans=LF199029:318 MA434606:318 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=318 |
| − | |distance_to_tss=- | + | |distance_to_tss=-3655 |
|end=120576916 | |end=120576916 | ||
| + | |end_of_center_position=120576908 | ||
|entrez_id=18453 | |entrez_id=18453 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=ERp59 | + | |gene_alias=ERp59{{!}}PDI{{!}}Pdia1{{!}}Thbp |
| − | |gene_description= | + | |gene_description=prolyl 4-hydroxylase, beta polypeptide |
|gene_name=P4hb | |gene_name=P4hb | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 15: | Line 20: | ||
|nearest_refseq=NM_011032 | |nearest_refseq=NM_011032 | ||
|nearest_unigene=Mm.16660 | |nearest_unigene=Mm.16660 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=mouse | |species=mouse | ||
|start=120576899 | |start=120576899 | ||
| + | |start_of_center_position=120576907 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF199029 MA434606 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_100524.1 | |tss_id=mm_100524.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:19, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120576907 |
|---|---|
| End of the center position in the TSS region: | 120576908 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF199029 MA434606 |
|---|---|
| Distance: | 318 |
| Num_trans: | 2 |
| All_trans: | LF199029:318 MA434606:318 |
TATA-Box annotation
| Distance to TSS: | -3655 |
|---|---|
| Nearest PromoterID: | NM_011032 |
| Entrez ID: | 18453 |
| Nearest Unigene: | Mm.16660 |
| Nearest Refseq: | NM_011032 |
| Nearest Ensembl: | ENSMUSG00000025130 |
| Gene Name: | P4hb |
| Gene Alias: | ERp59|PDI|Pdia1|Thbp |
| Gene Description: | prolyl 4-hydroxylase, beta polypeptide |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
