Difference between revisions of "TSS:Mm 100527.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|R75218= | |R75218= | ||
| − | |all_trans=ENSMUST00000093140.4:-4 NM_001038230 | + | |all_trans=ENSMUST00000093140.4:-4 NM_001038230:-4 AK136358:-27 AK003244:-34 AK045408:-57 AK003612:-62 AK158224:-93 ENSMUST00000148114.1:-96 ENSMUST00000026128.9:-115 NM_025389:-115 BC023039:130 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| Line 10: | Line 10: | ||
|entrez_id=66156 | |entrez_id=66156 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=1110011I19Rik | + | |gene_alias=1110011I19Rik{{!}}R75218 |
|gene_description=anaphase promoting complex subunit 11 | |gene_description=anaphase promoting complex subunit 11 | ||
|gene_id=66156 | |gene_id=66156 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_025389 | |nearest_refseq=NM_025389 | ||
|nearest_unigene=Mm.21645 | |nearest_unigene=Mm.21645 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=120598535 | |start=120598535 | ||
|start_of_center_position=120598542 | |start_of_center_position=120598542 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000093140.4 NM_001038230 | + | |transcript_name=ENSMUST00000093140.4 NM_001038230 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100527.1 | |tss_id=mm_100527.1 | ||
Revision as of 16:19, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120598542 |
|---|---|
| End of the center position in the TSS region: | 120598543 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000093140.4 NM_001038230 |
|---|---|
| Distance: | -4 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000093140.4:-4 NM_001038230:-4 AK136358:-27 AK003244:-34 AK045408:-57 AK003612:-62 AK158224:-93 ENSMUST00000148114.1:-96 ENSMUST00000026128.9:-115 NM_025389:-115 BC023039:130 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_001038230 |
| Entrez ID: | 66156 |
| Nearest Unigene: | Mm.21645 |
| Nearest Refseq: | NM_025389 |
| Nearest Ensembl: | ENSMUSG00000025135 |
| Gene Name: | anaphase promoting complex subunit 11 |
| Gene Alias: | 1110011I19Rik|R75218 |
| Gene Description: | anaphase promoting complex subunit 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
