Difference between revisions of "TSS:Mm 100533.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000061309.4:3 AB085945:7 BC134361:7 ENSMUST00000106194.7:-16 ENSMUST00000106195.2:-16 NM_153288:-16 | + | |all_trans=ENSMUST00000061309.4:3 AB085945:7 BC134361:7 ENSMUST00000106194.7:-16 ENSMUST00000106195.2:-16 NM_153288:-16 NM_001347617:-16 NM_001347616:-16 AK141698:-16 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 9: | Line 9: | ||
|entrez_id=208990 | |entrez_id=208990 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias= | + | |gene_alias=PPL7{{!}}mPPL7 |
|gene_description=neuropeptide B | |gene_description=neuropeptide B | ||
|gene_id=208990 | |gene_id=208990 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_153288 | |nearest_refseq=NM_153288 | ||
|nearest_unigene=Mm.29444 | |nearest_unigene=Mm.29444 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=120608492 | |start=120608492 | ||
Revision as of 16:19, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120608497 |
|---|---|
| End of the center position in the TSS region: | 120608498 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000061309.4 |
|---|---|
| Distance: | 3 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000061309.4:3 AB085945:7 BC134361:7 ENSMUST00000106194.7:-16 ENSMUST00000106195.2:-16 NM_153288:-16 NM_001347617:-16 NM_001347616:-16 AK141698:-16 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_001347616 |
| Entrez ID: | 208990 |
| Nearest Unigene: | Mm.29444 |
| Nearest Refseq: | NM_153288 |
| Nearest Ensembl: | ENSMUSG00000044034 |
| Gene Name: | neuropeptide B |
| Gene Alias: | PPL7|mPPL7 |
| Gene Description: | neuropeptide B |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
