Difference between revisions of "TSS:Mm 100534.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.015 |distance= |distance_to_tss=580 |end=120617314 |entrez_id=68671 |gc_percent=0.482587 |gene_alias=1110033E03Rik|ET |gene_description="...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ET= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=635 |
|end=120617314 | |end=120617314 | ||
| + | |end_of_center_position=120617311 | ||
|entrez_id=68671 | |entrez_id=68671 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| − | |gene_alias=1110033E03Rik | + | |gene_alias=1110033E03Rik{{!}}ET |
| − | |gene_description= | + | |gene_description=phosphate cytidylyltransferase 2, ethanolamine |
|gene_name=Pcyt2 | |gene_name=Pcyt2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000025137 | |nearest_ensembl=ENSMUSG00000025137 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363001 |
|nearest_refseq=NM_024229 | |nearest_refseq=NM_024229 | ||
|nearest_unigene=Mm.21439 | |nearest_unigene=Mm.21439 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=120617306 | |start=120617306 | ||
| + | |start_of_center_position=120617310 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:19, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120617310 |
|---|---|
| End of the center position in the TSS region: | 120617311 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 635 |
|---|---|
| Nearest PromoterID: | NM_001363001 |
| Entrez ID: | 68671 |
| Nearest Unigene: | Mm.21439 |
| Nearest Refseq: | NM_024229 |
| Nearest Ensembl: | ENSMUSG00000025137 |
| Gene Name: | Pcyt2 |
| Gene Alias: | 1110033E03Rik|ET |
| Gene Description: | phosphate cytidylyltransferase 2, ethanolamine |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
