Difference between revisions of "TSS:Mm 100541.1"
From referenceTSS
| Line 6: | Line 6: | ||
|RCC17= | |RCC17= | ||
|TUG= | |TUG= | ||
| − | |all_trans=ENSMUST00000171700.1:0 ENSMUST00000106158.8:0 ENSMUST00000168097.7:0 ENSMUST00000103016.7:0 AK162722:0 BC022115:0 BC019177:0 BC031153:0 AY349133:0 ENSMUST00000168714. | + | |all_trans=ENSMUST00000171700.1:0 ENSMUST00000106158.8:0 ENSMUST00000168097.7:0 ENSMUST00000103016.7:0 AK162722:0 BC022115:0 BC019177:0 BC031153:0 AY349133:0 ENSMUST00000168714.8:17 ENSMUST00000026135.14:-27 ENSMUST00000143844.8:32 ENSMUST00000169964.1:-46 NM_026877:-46 NM_001363055:-46 AK088197:57 NM_001363056:289 ENSMUST00000135346.7:293 ENSMUST00000127269.7:308 ENSMUST00000131727.8:308 ENSMUST00000149389.7:326 ENSMUST00000153346.7:338 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 15: | Line 15: | ||
|entrez_id=68938 | |entrez_id=68938 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=1190006K01Rik | + | |gene_alias=1190006K01Rik{{!}}ASPC{{!}}ASPCR1{{!}}ASPL{{!}}ASPS{{!}}RCC17{{!}}TUG |
| − | |gene_description= | + | |gene_description=alveolar soft part sarcoma chromosome region, candidate 1 (human) |
|gene_id=68938 | |gene_id=68938 | ||
| − | |gene_name= | + | |gene_name=alveolar soft part sarcoma chromosome region, candidate 1 (human) |
|gene_source=MGI:1916188 | |gene_source=MGI:1916188 | ||
|gene_symbol=Aspscr1 | |gene_symbol=Aspscr1 | ||
| Line 25: | Line 25: | ||
|hgnc_mgi_id=MGI:1916188 | |hgnc_mgi_id=MGI:1916188 | ||
|nearest_ensembl=ENSMUSG00000025142 | |nearest_ensembl=ENSMUSG00000025142 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363055 |
|nearest_refseq=NM_026877 | |nearest_refseq=NM_026877 | ||
|nearest_unigene=Mm.294020 | |nearest_unigene=Mm.294020 | ||
| − | |num_trans= | + | |num_trans=22 |
|species=mouse | |species=mouse | ||
|start=120673018 | |start=120673018 | ||
Revision as of 16:19, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120673042 |
|---|---|
| End of the center position in the TSS region: | 120673043 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000171700.1 ENSMUST00000106158.8 ENSMUST00000168097.7 ENSMUST00000103016.7 AK162722 BC022115 BC019177 BC031153 AY349133 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENSMUST00000171700.1:0 ENSMUST00000106158.8:0 ENSMUST00000168097.7:0 ENSMUST00000103016.7:0 AK162722:0 BC022115:0 BC019177:0 BC031153:0 AY349133:0 ENSMUST00000168714.8:17 ENSMUST00000026135.14:-27 ENSMUST00000143844.8:32 ENSMUST00000169964.1:-46 NM_026877:-46 NM_001363055:-46 AK088197:57 NM_001363056:289 ENSMUST00000135346.7:293 ENSMUST00000127269.7:308 ENSMUST00000131727.8:308 ENSMUST00000149389.7:326 ENSMUST00000153346.7:338 |
TATA-Box annotation
| Distance to TSS: | 69 |
|---|---|
| Nearest PromoterID: | NM_001363055 |
| Entrez ID: | 68938 |
| Nearest Unigene: | Mm.294020 |
| Nearest Refseq: | NM_026877 |
| Nearest Ensembl: | ENSMUSG00000025142 |
| Gene Name: | alveolar soft part sarcoma chromosome region, candidate 1 (human) |
| Gene Alias: | 1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG |
| Gene Description: | alveolar soft part sarcoma chromosome region, candidate 1 (human) |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
