Difference between revisions of "TSS:Mm 100548.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000026139.13:0 ENSMUST00000145781.7:0 NM_153545 | + | |all_trans=ENSMUST00000026139.13:0 ENSMUST00000145781.7:0 NM_153545:0 AK081566:0 AK153361:0 BC023296:8 ENSMUST00000151852.1:13 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_153545 | |nearest_refseq=NM_153545 | ||
|nearest_unigene=Mm.347545 | |nearest_unigene=Mm.347545 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=mouse | |species=mouse | ||
|start=120713919 | |start=120713919 | ||
|start_of_center_position=120713942 | |start_of_center_position=120713942 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000026139.13 ENSMUST00000145781.7 NM_153545 | + | |transcript_name=ENSMUST00000026139.13 ENSMUST00000145781.7 NM_153545 AK081566 AK153361 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100548.1 | |tss_id=mm_100548.1 | ||
Revision as of 16:19, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120713942 |
|---|---|
| End of the center position in the TSS region: | 120713943 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000026139.13 ENSMUST00000145781.7 NM_153545 AK081566 AK153361 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000026139.13:0 ENSMUST00000145781.7:0 NM_153545:0 AK081566:0 AK153361:0 BC023296:8 ENSMUST00000151852.1:13 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NM_153545 |
| Entrez ID: | 217366 |
| Nearest Unigene: | Mm.347545 |
| Nearest Refseq: | NM_153545 |
| Nearest Ensembl: | ENSMUSG00000025145 |
| Gene Name: | leucine rich repeat containing 45 |
| Gene Alias: | BC023296 |
| Gene Description: | leucine rich repeat containing 45 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
