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Difference between revisions of "TSS:Mm 100569.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000105046.3:1 uc033gby.1:96 uc007muk.1:171
+
|all_trans=ENSMUST00000105046.3:1
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 19: Line 19:
 
|nearest_refseq=NM_009053
 
|nearest_refseq=NM_009053
 
|nearest_unigene=Mm.871
 
|nearest_unigene=Mm.871
|num_trans=3
+
|num_trans=1
 
|species=mouse
 
|species=mouse
 
|start=120762792
 
|start=120762792

Revision as of 16:20, 19 June 2021

Basic information about the TSS


TSS ID:mm_100569.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:120762792
End:120762793
Strand:+
TSS Score:1
Start of the center position in the TSS region:120762792
End of the center position in the TSS region:120762793



Gene and protein annotation


Transcript_name:ENSMUST00000105046.3
Distance:1
GeneID:
HGNC/MGI_ID:
UniProt_ID:Q566K0
Gene_name:Rfng
Gene_symbol:
Gene_synonyms:
Gene_source:



Transcript annotation


Transcript_name:ENSMUST00000105046.3
Distance:1
Num_trans:1
All_trans:ENSMUST00000105046.3:1



TATA-Box annotation


Distance to TSS:21411
Nearest PromoterID:NM_009053
Entrez ID:19719
Nearest Unigene:Mm.871
Nearest Refseq:NM_009053
Nearest Ensembl:ENSMUSG00000025158
Gene Name:Rfng
Gene Alias:-
Gene Description:RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Gene Type:protein-coding
CpG%:0.025
GC%:0.532338
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):